Pediculus humanus corporis (human body louse): Phum_PHUM570120
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Entry
Phum_PHUM570120 CDS
T01223
Name
(RefSeq) regulator of nonsense transcripts, putative
KO
K14327
regulator of nonsense transcripts 2
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03013
Nucleocytoplasmic transport
phu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Phum_PHUM570120
03015 mRNA surveillance pathway
Phum_PHUM570120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM570120
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Phum_PHUM570120
mRNA cycle factors
P-body specific factors
Phum_PHUM570120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
8234899
NCBI-ProteinID:
XP_002432118
UniProt:
E0W174
LinkDB
All DBs
AA seq
1166 aa
AA seq
DB search
MTDSKTPSKGEGEEGKKELIKPEDEDENDDESKKLEMDDGKKEEEEEEEKIKKQALLDYI
EELEKKDKRRQEARNKNINVKRPEESYFSKLDSNLKKNTAFVRKVKNFSANQLNGLLNDL
KVLNLSKYVTEIASAVTEAKLKVADILPACELCCALHRLYADFENALMECWKKSLTIKSD
EPVSNNLKYKIDLKLYAELVLLGLWAVPPPSRGLQLLGSIILSLVHNQKEDFSNISAILS
FLRSFGDVYAGLIPREMAEASKKFNISIPSMTIIPSEKHKTVRQVFQDYYDSFCKHLIKN
HNELQKFETHSRSILQTKGELSTNRKAEYNDLLTEYKKLLDYARQFSEILNAPMPVLPIE
EVTKSETTVIDELLLSHDERFPLGIWEDEETQRFYECLPDLHVFLPQLPIDAPKQKRTSI
SEISEEILDEEIELPTDETDEEKKPETEHEVEAVTDTKTKYIFNDFLFHLPSCCNRDTVD
NMAIEFVLNLNTKHNQKKLAKHLFGVNRTRLDLLPFYSRLVATIHLVAPDVATDLCQMLK
QDFLYHVQKKDQINIESKIKVVRFIGELIKFKMYSKLEGLFCIKILLQDFSHHHHIEMVC
NLFETCGRFLFNHPESRQRTKVYLEQMMRKKSVMALDSRYATMTENAFYAVIPREGGQTV
KKERPPIHEFIRQILYHELSRQNVSMVIKLLHKVDWNDPELSAYVVKCLVNAWNVKYFNI
KTLAGLVADISRHYEKIQIEVVDGVLEDIRLGLEVMEPKYNQRRIAMVKYLGELYYYRMA
DSSDILKVLYLLISLGVTFNYNNPSPLDPPGHTFRLSLVCVLLETCGQYLRSATSRKKLD
YFLVFFQNYFWYKFTDPFWTTENPFPPRLRHMVRDCLLSVRPKMIIFHNYAESQEAVEEL
KKHFLSKLKTEIKQPTAATTTTTTTGVGELNPIDEKDESEVEFVEGNDEECCEDDERESS
DEESQTFEGGNPSSQSQGEDIPSILSESNESENPTKMQGVQKVKCQEDEDFMNAFDKLVA
DQIQDRMRERITPQQIDISVPLHVRANTKKTYEQLKEKSEETQTVNFILMIRKGNKHSYK
SLNVPIMSELAINLKEQEMLERMEKEKVKKLTLDINERLEEEDYQDMINQTQRPAVSNLN
RERKQKYQHPKGAPDVDLIFGSSKGK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagtaaaacaccaagcaaaggtgagggagaagaaggaaaaaaagaattaatc
aaaccggaagatgaagatgaaaacgatgacgaatcgaaaaaattagaaatggatgatggg
aaaaaagaagaagaagaagaagaagaaaagataaaaaaacaagctcttttagattacatt
gaagaacttgagaaaaaagataagagaagacaggaagcgagaaataaaaatattaatgtt
aaaagacccgaagaatcatatttttcaaaattggattcgaatttgaaaaaaaatacagca
ttcgttagaaaagttaaaaatttttcagccaatcaattaaatggtttactcaacgattta
aaagttttaaatttatctaaatatgtgactgaaattgcatctgcagtgactgaagccaaa
ttaaaagttgccgatatattaccagcttgtgaattgtgttgtgcactacatagattatat
gccgattttgaaaatgctctcatggagtgttggaaaaagtcattgacaataaaaagtgat
gaaccagtctcgaataatcttaaatataaaatcgatttaaaattatatgcagaattggtt
ttgttaggactttgggcagtaccacctccatcgagaggtttacaactgttaggttcgata
atattaagtttagttcataatcaaaaagaagattttagtaatatatcagccatattaagt
tttcttagaagtttcggagatgtttatgccggtttgataccaagagaaatggctgaagca
tctaagaaatttaatatatcaattcctagtatgacaattataccaagtgaaaaacataaa
acagttaggcaagtttttcaagattattatgattcattttgtaagcacttaattaaaaat
cacaatgagttacagaaatttgaaactcatagtcgaagcattttacaaacaaaaggtgaa
ttaagtactaatagaaaagcagaatataatgatttattaacggaatataaaaaattattg
gattatgctagacaatttagtgaaatattaaatgctccaatgccagtgctgccaatagaa
gaagttacaaaatcagaaacgacagtcattgacgaattacttttaagtcacgatgaaaga
tttccactgggaatatgggaagatgaagaaactcaaagattttacgaatgtttaccggat
ttgcatgtttttctaccgcaactccctatcgatgcgcccaaacaaaaaaggacgtcgata
tcggaaataagcgaagaaatattagacgaagaaatagaattgccaacggatgaaacggac
gaggaaaaaaaaccggaaacggaacacgaagtcgaagctgtgacggatactaagacgaaa
tacatattcaacgattttttatttcatttaccgagttgttgcaatagggacacggtcgat
aacatggccatcgaattcgtgttgaatttaaatacgaaacacaatcagaaaaaattagcc
aaacatttgttcggagttaatagaacgagactcgatttattgccattttattcgagattg
gttgccacgattcatttggtggcacccgacgttgccaccgacctttgtcaaatgctcaaa
caagatttcctttatcacgttcaaaaaaaagatcaaataaatatcgaatcgaaaataaaa
gtcgttcgattcatcggcgaattgattaaatttaaaatgtattcgaaattggaaggttta
ttttgcataaaaatcctgctccaagatttcagtcatcatcatcacatcgaaatggtttgt
aatttattcgaaacgtgcggacgatttttattcaatcatcccgagagtcgacaaagaacc
aaagtttatttagaacaaatgatgaggaagaaatccgtcatggcactggattcgaggtat
gccacgatgacggaaaatgcattctacgccgtcatacctcgcgagggtggacaaaccgtt
aaaaaagaaaggccacccatacacgaattcataaggcaaatattgtaccacgaattgagt
aggcaaaacgtaagcatggtcattaaactcttacataaagtcgattggaacgatccggaa
ctttcggcttacgtcgtcaaatgtttggtcaacgcttggaacgttaaatatttcaatata
aaaacattggccggattggtggccgacatatctcgtcactatgaaaaaattcaaattgaa
gttgtcgacggagtattggaagacatacgactcggtttggaagtcatggaacccaaatat
aatcagagacgcatcgccatggtcaaatatttaggagagctttattattatcgcatggcc
gacagcagcgacatattgaaagtcctttaccttctcatatcgctcggagtgactttcaat
tacaacaatccatcccctctcgatcctccgggtcacacgtttcgattgagtttggtatgc
gttctcctcgaaacttgcggacagtatttgagatccgcgacgtctaggaaaaaattggat
tattttttggtattttttcaaaattatttctggtacaagttcacggatccgttttggacg
acggaaaatccttttcccccgagattgagacacatggtgagagattgcctgctcagcgtt
cgtccgaaaatgatcatttttcacaattatgcggaatctcaagaggccgtggaagaattg
aaaaaacattttctgtcgaaattaaaaacggaaatcaaacaaccgacggcggcgacgacg
acgacgacgacgacgggcgtcggagaattgaatcccatcgatgaaaaagatgagagcgaa
gtggaattcgttgagggaaacgacgaagaatgttgcgaagatgatgaacgggaatcgagc
gacgaagaaagtcaaacgttcgaaggtggaaatccgagtagtcaaagtcaaggcgaggac
attccctcgatcctttccgaaagcaacgaaagtgaaaaccctacgaaaatgcagggagtt
caaaaggtcaagtgtcaagaagacgaagatttcatgaacgctttcgacaaattggttgcc
gatcaaatacaggacagaatgagagaaaggataacgcctcaacaaatcgacatatccgtt
cctttgcacgttcgcgcgaacacgaaaaaaacgtacgaacagttgaaggagaaaagcgaa
gaaactcaaaccgttaattttatactcatgataagaaaaggaaacaaacactcgtacaag
agtctcaacgttcccataatgtccgaactcgcgatcaatttaaaagaacaggaaatgctc
gaaagaatggaaaaggaaaaggttaaaaaattaacactggatataaacgaaaggctcgaa
gaggaagattatcaggacatgataaatcaaactcaaaggccggcagtttcgaatttgaat
agagaaaggaagcagaagtaccaacatccgaaaggtgcaccggatgttgatttgatattc
ggttcgagtaaaggaaaatga
DBGET
integrated database retrieval system
