Pediculus humanus corporis (human body louse): Phum_PHUM576040
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Entry
Phum_PHUM576040 CDS
T01223
Name
(RefSeq) ATP-dependent RNA helicase Ddx1, putative
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM576040
03016 Transfer RNA biogenesis [BR:
phu03016
]
Phum_PHUM576040
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM576040
Spliceosome [BR:
phu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Phum_PHUM576040
Transfer RNA biogenesis [BR:
phu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Phum_PHUM576040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
8239527
NCBI-ProteinID:
XP_002432190
UniProt:
E0W1E6
LinkDB
All DBs
AA seq
741 aa
AA seq
DB search
MTAFEKMGVMPEIAKAVNDMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVHETLLDISQGKTSKISNVNTNTQGSNKWGLSFFDRSSAMAVTPDGLRCQSREAQEW
HGCRATKGVKGKGQYYYEATVTDEGLCRVGWATGHSSLDLGTDKYGFGFGGTGKKSNSRQ
FDNYGEPFGMHDVIGCYLNLDDMEIKFSKNGKDLGVAFRVPGNLKDAVFFPAVVLKNAEM
SFNFGDSNFKYPPSGNYVAVSKAPENCISNNTNGVSSGPPSGGVTKKVNNAPQAIIIEPS
RELAEQTYNQLGKFKTHLPSPISTLLVVGGVPVKDQISALNSGVDIVCGTPGRLEELIST
GHLSLTQCRFFVLDEADGLLKQGYSQLIDRVHKQIPKITSDGRRLQMIVCSATLHDFEVK
KMADKLMHFPTWVDLKGEDAVPETVHHVVVMIDPQKDRSWETLRYHIQTDGVHANDNVRP
KNNTPETLSEAVKMLKGEYCVRAINEHKMDRAIIFCRTKLDCGNLERYFNQLGKGPRNPQ
NPYSCVCLHGDRKPNERKANLEKFKNKEVKFLICTDVAARGLDVSGLPFMINVTLPDEKS
NYVHRIGRVGRAERMGLAISLVSSVPEKVWYHGQWCPSRGQNCFNTNLTDVKGCCIWYNE
PRYLAEIEDHLNVTIQQVEPDIKVPVNEFDGKVVYGQKRTQTGTNYQNHVAQMAPAVKDL
TSLESKAQLIYIQRHFNKKIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaaaaaatgggtgttatgcccgaaatagctaaagccgtcaatgatatg
gaatggactttaccgacggatgttcaagcagaagccataccacttattctaggtggagga
gatgtacttatggcagcagaaaccgggagtggaaaaactggggcattttgtcttccgata
ttacaaatcgtacacgaaacattattggatatatctcagggtaaaacgtcgaaaatctca
aatgttaatacaaatactcaaggatcgaataaatggggtcttagttttttcgacaggagt
tcagccatggctgtcactcccgatggattacgttgtcaatcacgcgaagctcaagaatgg
cacggatgtcgtgctacaaagggtgtaaaaggtaaaggtcaatattactacgaagctacc
gttacggatgagggtttgtgccgtgtcggatgggccaccggtcattcgagtttagatttg
ggtaccgataaatatggcttcggatttggtggtaccggtaaaaaatcaaattcaagacaa
tttgataattacggagaaccttttggaatgcacgacgtcattggttgttatttaaattta
gacgacatggaaataaaattttcgaaaaatggcaaagatttaggtgtggcatttagagtg
ccaggaaatttaaaagatgccgttttttttcctgcggtggttttaaaaaatgccgaaatg
tcatttaatttcggtgatagtaatttcaaatatcctccttccggcaattatgtagccgta
tcgaaagcacctgaaaattgcatttccaacaacacaaacggagtttcgagtgggcctccc
tctggtggggtaacgaaaaaagtcaacaacgcaccacaagcaataattatcgaaccttct
agagaacttgccgaacaaacttataatcaacttggaaaatttaaaactcatttaccatcc
ccgatatcgactctactcgtagtcggtggagtacccgtcaaagatcaaatatcagcattg
aattccggagtcgacattgtttgcggtactccgggtagattagaagaattaatatcaaca
ggtcatttatcacttacccaatgtagatttttcgttttagacgaagctgacggtttacta
aagcagggttactcccaactcatagacagagtccacaagcaaattccaaaaataacatcc
gacggtcgtagattacaaatgatcgtttgttcggcaactctccacgacttcgaagttaaa
aaaatggctgataaattaatgcattttccaacatgggtcgatttgaagggcgaagatgcc
gtacctgaaactgtacatcacgttgtcgtaatgatcgaccctcaaaaagatagatcttgg
gaaactctcaggtatcacattcaaacggatggcgttcacgcaaacgacaacgtaagaccg
aaaaacaacacgccggaaacactttccgaagccgttaaaatgctaaagggtgaatattgc
gtgagagcaatcaacgaacacaaaatggatcgagccatcatattttgcagaacgaaactc
gattgcggtaatttggaaaggtatttcaatcaattgggtaaaggacccagaaatcctcag
aatccgtattcttgcgtttgccttcacggggatagaaaaccaaacgaaagaaaagcaaat
ttggaaaaattcaaaaacaaagaagttaaatttctcatttgcacggatgttgctgcgaga
ggtttggacgtgtcaggacttccgttcatgataaacgtgacacttcccgatgagaaaagt
aattacgtgcacaggataggtcgagtaggaagagccgaaagaatgggtttggccatatcc
ctagtgagttctgtgccggaaaaagtctggtaccacggtcagtggtgtccttcgagagga
caaaattgtttcaacacgaatctcacggacgtgaaaggttgttgcatttggtacaacgaa
cccagatatttagcggaaatagaagatcatttaaacgtaacgatacaacaagtcgaaccg
gatattaaagtacccgttaacgaattcgacggtaaagtcgtatacggacaaaaacgtact
caaaccggtacgaattatcaaaatcacgtcgctcaaatggctcccgccgtaaaagattta
acatctttagaaagtaaagcgcaactcatatacatacaaagacattttaataaaaaaatt
gcttga
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