Pediculus humanus corporis (human body louse): Phum_PHUM579790
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Entry
Phum_PHUM579790 CDS
T01223
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM579790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM579790
03012 Translation factors [BR:
phu03012
]
Phum_PHUM579790
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Phum_PHUM579790
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
Phum_PHUM579790
Translation factors [BR:
phu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Phum_PHUM579790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
nSTAND3
DEAD
PhoH
ATPase
AAA_22
RsgA_GTPase
AAA_23
HMUD2
AAA_19
Motif
Other DBs
NCBI-GeneID:
8232502
NCBI-ProteinID:
XP_002432278
UniProt:
E0W1U6
LinkDB
All DBs
AA seq
918 aa
AA seq
DB search
MSKSKSYFYKKGVNCNKPFKSAREQNSNANLFGEKSNRRGESFPSKQERPDKPPPGLKGK
EIGLWYRDRQRSKDEKPLSIVLNASKLDEIEEVLYKVGTLKEDVKFHKDFQQRFLEKINV
TFEEKLNQSDIVKFKSDPELDEELYEEINKKKGHSKHFQKMLDFRQRLPSFKKRKELVDL
IENNQMIVISGETGCGKTTQVVQFVLDDYIFKKKGSLCNIVCTQPRRISAISVAERVALE
RDEKIGESVGYIIRLESEVPKRKSGSITYVTTGVLVQMLQSDPALKTHSRPDLKVVLMSA
TLNADRFSEYFGGIPRIEIPGFTYPVEEIYLENILTKMKFQFPISRKKLDPVFSNYVIPY
INNLEKSNEFPRAVTNILRNPESESLNVQFIAQVIEFICNTEPEGAILVFVPGLAQIQDL
NKLLNSKTYGSRRNLIIPMHSILPTVNQKQAFQRPPPGVRKIILATSIAETSITIDDVVY
VVDCGRLKAKGFDLKKNVMTLEPEWETLANARQRRGRAGRIQPGKCYKLFTRAREETFEP
FPIPEMQRTRLEEVILHAKTLQLGRIRPFLEKLMDPPDAEAINLSLKMLLTINALDNEER
LTPLGYHLAKLPMDPQTGKMILMGALFSCLDPILSIAACLNYKDPFIFLLGSEYKVHEKR
FKFSRGEKSDHFMLSEAFREWEEAEYGGFGLNFAYENYLSNHNLHLLRSMKRQFARHLQK
MNFIISDDPKHPTSNYNSHNVSLIKALVCSGLYPNVAMIKKVVKKKTEGVSRVVWKTADH
PKVEIHVKSLLEKVKHFESPFLVYFEKIKSSSIFLHDATMVYPMALLFFGERLNIIQENN
GYSVRVDDMIKFICFKKTASLVQKLRTQLLLLLESAISNPGVVDWEKESQTTVILRAIVK
LITSEDQTSLEAFNVDFE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagtaaaagttacttttataaaaaaggagtcaattgtaataaaccgtttaaa
tcggcaagagaacaaaatagcaatgctaatctttttggagaaaaaagtaatagacgagga
gagtcttttccttcaaaacaggaaagaccggataaacctcctccaggattaaaaggaaaa
gaaatcgggttgtggtatagagatagacaacgtagtaaagatgaaaaaccattatcaatt
gttttaaatgctagtaaattagatgaaattgaagaagtcctatacaaagtgggtactttg
aaagaagatgttaaatttcataaagattttcaacagaggtttttagaaaaaataaatgtt
actttcgaagaaaaactaaatcaatctgatattgttaaatttaaatctgatcctgaatta
gatgaggaattatatgaagaaataaataaaaaaaaaggtcatagtaagcattttcaaaaa
atgcttgattttcgacaaaggttaccctcattcaaaaaaagaaaagaattggttgattta
attgaaaacaatcaaatgattgttatttcaggagaaacaggttgtggaaaaaccactcaa
gtggttcaatttgtattagacgattacatatttaagaagaaaggatcattatgtaatatt
gtgtgcactcaaccgagaagaataagtgcgatttcggttgctgaaagagttgcattggaa
agagatgaaaaaattggtgagagtgttggttacattattagattagaaagcgaagtacca
aaaagaaaaagcggatcgattacttatgtcactactggagttttagttcaaatgcttcaa
tctgatccagcattaaagacacactctagacctgatctgaaagttgtattaatgagcgca
acattaaacgcggatcgtttttccgaatattttggcggaatacctagaatagaaattcca
ggttttacttatccagttgaagaaatttatttggaaaatatattaactaaaatgaaattt
cagtttcctatttccaggaaaaaacttgatcccgtttttagtaattatgttataccgtac
attaataatttggaaaaatcaaatgaattcccacgggctgtgacaaatatactaaggaat
ccagaatcggaatctcttaacgttcaattcatagctcaagtcattgaatttatttgtaac
acggaaccggaaggagccatattggtttttgttcctggtttagcacaaattcaagattta
aataaattgttaaattccaaaacttacggttctcgtagaaatttaattattccaatgcat
tccattttaccaacggtcaatcaaaagcaagcatttcaaaggccaccaccgggagttcga
aaaataattttagccacgtccattgcagaaacgagcataacgatagacgatgtcgtttac
gtcgtggattgtggtaggcttaaggcaaaaggtttcgatttaaaaaaaaacgttatgact
ttagagcccgagtgggaaactttggccaatgcaagacagagaagaggacgagctggacga
attcaaccagggaaatgttataaattatttacgagagccagagaagaaacatttgaaccg
tttccgattccagaaatgcaaaggactcgtttggaagaagttatattgcacgctaaaact
ttgcaattgggtcgcatccgaccatttttagaaaaattaatggatcctccagatgcggaa
gcgataaatttatctcttaaaatgcttttgaccatcaacgcactcgacaacgaagaacgt
ttgactcctttgggttatcatttggcaaaattacccatggatccccaaaccgggaaaatg
atactgatgggagcccttttcagctgtctcgatccgatactttctatagctgcttgtctc
aattacaaagatccctttatcttcttactcggaagcgaatataaagtccacgagaaaaga
tttaaattttcacgcggagaaaaaagtgatcatttcatgttgagcgaagcgtttagagaa
tgggaagaagccgaatatggcggtttcggtttgaatttcgcatacgaaaattatttgtcg
aatcataatttgcatttattaaggagcatgaagagacaatttgcgagacatttacaaaaa
atgaattttataattagcgacgatcctaaacatcctacgagcaattataattcacacaac
gttagcctgataaaagcattggtgtgttcaggactttatcccaacgtggccatgataaag
aaagtcgttaaaaaaaaaacggaaggagttagtagagtcgtttggaaaacggcagatcat
ccgaaagtcgaaatacacgtcaaatcccttttggaaaaagtcaaacatttcgaaagtccg
tttttagtttatttcgaaaaaataaaaagcagttcgatatttttacacgatgcgaccatg
gtctacccgatggctctactgttcttcggcgaaaggttaaacatcatccaagaaaataac
ggatattccgtgagagtcgacgacatgatcaaattcatatgttttaaaaaaactgcatct
ctcgttcagaaattgagaacacaattgcttcttctcctcgaatccgccatatcgaatcct
ggagtcgtggattgggaaaaagaaagtcaaacgaccgttattttaagagccatcgtcaaa
ttaatcacttccgaagatcaaacttcattggaggccttcaacgttgatttcgaataa
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