Pediculus humanus corporis (human body louse): Phum_PHUM580750
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Entry
Phum_PHUM580750 CDS
T01223
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4, putative
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM580750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM580750
Spliceosome [BR:
phu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Phum_PHUM580750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
PRP4
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_like
WD_LRWD1
WD40_RFWD3
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
8232333
NCBI-ProteinID:
XP_002432324
UniProt:
E0W1Z2
LinkDB
All DBs
AA seq
509 aa
AA seq
DB search
MSDDEEIIYVKRPKKIHYGSLEEQERAKLLESLKDDADKDAGSLLSGNIHISDEYMDIED
EVSKDRAALLEEFERRKRARQIHVSTDDDQVKKNLRQLGEPICLFGEGPADRRSRLRDLL
SKLGEDAIQRKQVEEETRIQQEKDQESTWYHEGPMALRTARLWIAVYSLPRAQKRIEEAK
MRAQQSDTSRTARRNEVHKKIQAVTIFASQIGDTRPISFCQFSPNSEYLATASWSGLCKL
WSVPKCELIKTYKGHNCNVGAIVFHPMATLEERNNSCSLASCASDGTVKLWSLENDEPIK
DIEGHAPYRVSKLAFHPSGRFLGTCCYDSSWRLWDLSIGQEVLHQEGHCKPVHCLSFQND
GSVAASGGLDAFARVWDLRTGRCIMFMEGHLKSIYSIDFSPDCYQVATGSEDNTCKIWDL
RKRECVYTIPAHMNLISDSKFQKSGGFFLVTASYDNTAKVWSNKTWQPLRTLSGHDNKVM
SVDVSKDTQFIATSSYDRTFKLWAPEAMA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgaagaaattatatacgtgaaaagaccgaaaaaaatacattacggatcg
ttggaagaacaagaaagagcaaagcttttggagagtttaaaagatgacgccgataaagat
gccggttcgttattatcagggaatattcacatatctgatgaatacatggacattgaggat
gaagtatccaaagacagggctgcgttgttggaagagttcgaaaggcgtaaaagagcgaga
caaattcacgtgtccacggatgatgatcaggttaaaaaaaatttgaggcaattgggtgaa
ccgatatgtttgtttggtgaaggtccagccgacaggaggagcaggttaagagatttgttg
tctaaactgggtgaagatgctatacagaggaagcaagttgaagaggaaaccagaatacaa
caggaaaaagaccaggagagtacatggtatcacgagggtccaatggctttaagaacagcc
agactttggattgctgtctattcgctgcccagagctcaaaaaagaatagaagaagccaaa
atgcgtgctcaacaatcagatacgagtcgaactgctagaaggaatgaagtacataaaaaa
attcaagcagtgacaatatttgctagtcaaataggagacaccaggccgatttcattttgt
caattttcaccaaattctgaatatctagcgacagcttcttggagtggtttgtgtaaattg
tggtctgtgcctaaatgtgaattaattaaaacatacaaaggacataattgtaatgttgga
gccatagtgtttcatcccatggctactctggaagaaagaaacaattcttgttcgttagca
tcttgtgcctctgacggcacagtcaaattgtggtctttagaaaatgacgaacctatcaaa
gatatcgaaggacatgctccttacagagtctctaaattagcttttcacccttctgggaga
tttttaggtacatgttgttacgattcatcatggagactgtgggacttgtcaatcggacaa
gaagtccttcatcaagagggacactgtaaacctgtacactgtttgtcgtttcaaaacgat
ggttctgtcgctgcatcagggggcctcgatgcttttgccagagtctgggatttgagaacg
ggaagatgcattatgtttatggaaggtcatctcaaatctatatacagcatagacttttca
ccggattgttatcaggtggcaacgggtagcgaagataatacttgtaaaatatgggatctc
agaaagcgagaatgcgtgtacacgataccggctcacatgaatttaatatccgattcgaaa
tttcaaaaatccggaggatttttcctagtgaccgcatcctacgataacacggccaaagtt
tggtcaaataaaacctggcaaccgttgagaacactatccgggcacgataataaagtcatg
agcgtggacgtatcaaaagacactcaattcatagcgacaagttcttacgacagaacgttt
aagttatgggctccggaagcaatggcttga
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