Pediculus humanus corporis (human body louse): Phum_PHUM584740
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Entry
Phum_PHUM584740 CDS
T01223
Name
(RefSeq) XPA-binding protein, putative
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Phum_PHUM584740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM584740
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM584740
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Phum_PHUM584740
Spliceosome [BR:
phu03041
]
Complex B
Other components
Prp19-related factors
Phum_PHUM584740
Complex C
Phum_PHUM584740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_8
TPR_2
TPR_12
TPR_15
NRDE-2
TPR_10
ARM_TT21
DHR-2_Lobe_A
DALR_1
PPR
Motif
Other DBs
NCBI-GeneID:
8232548
NCBI-ProteinID:
XP_002432456
UniProt:
E0W262
LinkDB
All DBs
AA seq
858 aa
AA seq
DB search
MKTLEKDNDKENMIIFSEEDLAYEEDIIKNPYSVKHWLRYIEHKKFGPDEEINITYERAL
KELPGSYKLWYNYLKLRRTQVKNIKVTDPIYEEVNSAFERSLVFMHKMPRIWLDYCQFIT
DQRLITRTRQIFDRALRALPITQHHRIWPLYIKFVKSHNIPETAVRVFRRYLKLCPEDTE
DYVEYLISIGRLDEAALKLAHIVNTDDFVSKHGKSKHQLWNELCELISKNPTKVRSLNVE
AIIRGGLRRYTDQLGHLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQIFDTYAQ
FEELSLSKRMEEVSNEPNPSEEDDIDLDLRLARFEHLMERRLLLLNSVLLRQNPHNVHEW
QKRVLLYEGKPLEIIDTYTEAVQTVDPKLAVGKLYTLWVNFAKFYEKNDQIEDARLIFEK
ATQVSFTKVDDLASIWCEWAEMEIRHENFSEALKLMQKATVPPPRKVDYHDDSETVQSRL
YKSLKTWSMYADLEESFGTFKTCKAVYDRIIDLRIATPQIIINYGSFLEEHNYFEEAFRA
YEKGIALFKWPNVYDIWNTYLTKFLKRFGGTKLERARDLFEQCLENCPPKYAKTLYLLYA
KLEEEYGMARHAMAVYEKATSAVLPEEMFELFNIYIKKAAEIYGVPKTRQIYEKAIEVLD
EASARDMCLRFADMERKLGEIDRARAIYAHCSQMCDPRVTGDFWQTWKEFEIRHGNEDTV
REMLRIKRSVQATYNTQVNMMSVQMLSASGSLSAGTVADLAPGAKDGMRLLEAKAAEMSV
GGAGGGGGSKQGNSILFVRGETHVQTKAGLDAKVINPEEIDIDDDYEEEEEDEGDGEDMP
VEKEVPAEVFGSLNPTAK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttagaaaaagataatgataaagaaaacatgataatttttagtgaagaagat
ttggcttatgaggaagatattattaaaaatccttattctgttaaacactggttaaggtat
attgagcataaaaaatttggaccagatgaagaaataaatataacatatgaaagggctctc
aaagagttacctggaagttataaattatggtacaattacttaaaactcagacgaacacaa
gttaaaaatattaaagtaacagatccaatatatgaagaagttaatagtgcattcgaaaga
tcattggtttttatgcataaaatgcctagaatttggttagattactgtcaatttatcact
gatcaacgacttattacaagaactaggcaaatatttgacagagctttaagagctttaccc
attactcaacaccatagaatttggccattgtacataaagttcgttaaaagtcacaacatt
cccgagactgccgtcagagttttcaggaggtatttaaagctatgtcctgaagatactgaa
gattatgtagaatatctaatatcaataggtagattagatgaagcagctttgaaattggca
cacatagttaatactgatgattttgtatccaaacatggaaaatctaaacatcagttatgg
aatgaactttgtgaactaatttctaaaaatcccaccaaagtcaggtcacttaacgtagaa
gctattattagaggaggattgagacggtatacagatcaattgggacatttatggaattcg
ttggctgactattatgttcgaagtggacttttcgagagggcgagagacatatacgaagaa
gccattcaaacagtgacgacagtaagggatttcacacagattttcgatacttatgctcaa
ttcgaagaattaagtctcagtaaaagaatggaagaagtttcgaatgaaccgaatcctagc
gaagaagatgatatagatttagaccttcgtttggcaagattcgaacacttgatggaaaga
agattgttacttcttaattctgtattgttaaggcaaaatccacataatgtacatgaatgg
caaaaaagagttcttttatacgaaggaaaacctttagaaatcatagacacttatactgaa
gcagttcaaacagttgatcctaaactagccgtgggtaaattgtatactttgtgggtaaat
tttgcaaaattttacgaaaaaaacgatcagatagaagatgcaagacttattttcgaaaaa
gcaactcaagtgtcctttacaaaagttgatgatttagcatcgatttggtgtgaatgggct
gaaatggaaatcagacacgaaaatttttcggaagctttaaaattaatgcaaaaagcaacg
gttcctccacctagaaaagtagactatcacgacgattcggaaacggttcaaagcaggttg
tacaaatcattaaaaacctggtctatgtatgcggatttagaagaaagctttggaacgttt
aagacgtgcaaagccgtgtacgatcgaattatagatttaagaatagcaacgccacaaata
ataatcaattacggttcgtttctagaagaacataattatttcgaagaagcttttcgagct
tacgaaaaaggaatcgcattattcaaatggccgaacgtttacgacatttggaacacttat
ttgacaaagtttttaaaacgtttcggcggtacgaaattggaaagagcgagagatcttttc
gaacagtgtttggaaaattgtcctccgaaatatgccaaaactttatatttactctacgcc
aaattggaagaggaatacggaatggcgagacacgcgatggcagtctacgaaaaagcaacc
tccgcggtactcccagaagaaatgttcgaattgttcaacatttacataaagaaagctgcc
gaaatatacggagtacctaaaacacgtcaaatatacgagaaagccatagaagttttagac
gaggcgagcgcaagagatatgtgtttgagatttgccgacatggaaagaaaactcggggaa
atcgatcgtgcgagagccatatacgcacactgcagtcaaatgtgcgatcctagggttacc
ggtgatttttggcaaacgtggaaagaatttgaaattcgtcacggtaacgaagatactgta
agagaaatgttgaggattaaacgaagcgttcaagcgacttataacactcaggttaacatg
atgtcggttcaaatgctttccgcatccggaagtttatccgccggtacggttgccgatcta
gccccgggagccaaagacggaatgagacttttagaagcgaaagcagccgaaatgtcggta
ggaggagcaggaggtggaggaggatctaaacaaggaaacagtatattattcgttagaggt
gaaactcacgtacaaacaaaagcgggtctcgatgcaaaagtcatcaatcccgaagaaatc
gatatcgatgacgattacgaagaagaagaagaagacgaaggtgatggtgaagacatgcca
gtggaaaaagaagttcctgcagaagttttcggaagtttaaatccaacagcgaaatga
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integrated database retrieval system
