Pediculus humanus corporis (human body louse): Phum_PHUM598500
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Entry
Phum_PHUM598500 CDS
T01223
Name
(RefSeq) CCR4-NOT transcription complex subunit, putative
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Phum_PHUM598500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM598500
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Phum_PHUM598500
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Phum_PHUM598500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8236853
NCBI-ProteinID:
XP_002432717
UniProt:
E0W2X3
LinkDB
All DBs
AA seq
383 aa
AA seq
DB search
MFPGSAGINSSFTPQPHSPIRNLQGMGSSRNFTGVRPFTERRPMASLGSSNPMGSMGSFG
MPTNRQYGSQGTMNSFHSVFGVSGDNNTPPLLDLNEFPSLTNRGQGDSMPRPSPMPGKQP
YVGMVKQPTSETSEFTMSSEDFPALPGTQSNSGPTSSSDKGLVGLSNSDSSHDVTSRAPG
AEKSGGTKRGIQTSPDGKVTHIPNSMVKDQFGMIGLLQFIRAAESDTNLMSLALGQDLTA
LGLNLNQPENLYPNFGGPWAEHLCRPQDIDYHVPPEYLINAGIRDKLATMKFSRYKDDLL
FYLFYTYVGDLMQLIAAAELYERDWRYHTDEKVWLTLIPGMDNTYYFFDPQNWRKVAKEF
HLDCTKLEARPNLQTLGAQQPVQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgggatctgcaggaatcaacagctcgtttactccacagccacattctcccatc
agaaaccttcagggaatgggcagtagtaggaatttcactggcgtacgaccgtttacagaa
cgaagacccatggccagcttaggaagtagtaatcccatgggatcaatgggcagctttgga
atgccaacaaacagacagtatggatcacaaggaactatgaatagttttcattctgtgttt
ggagtttctggtgataataatacacctcctcttcttgatctcaatgaatttccatcactt
acaaacagggggcaaggtgactctatgccaagaccaagtcctatgcctggaaagcagccc
tatgttggtatggttaagcaaccaacatcagaaactagtgaattcacaatgagtagtgaa
gactttccagctttgcctggaacccaaagtaattctggtccaacatcaagctcagataaa
ggtttagttggtctttcaaacagtgattcttctcatgatgttacaagcagggcgcctggt
gcagaaaaaagtggaggaactaaacgaggaattcaaacatctccagacggcaaagtaact
cacatacccaacagtatggttaaagatcagtttggtatgattggtcttttgcagttcata
agagccgcagagtcagatacaaatctcatgtctttagcgctggggcaagacttgactgcc
ttgggacttaatctaaatcaacctgaaaacctttatccaaattttggtggtccttgggcg
gaacacctttgtagacctcaagatatcgattatcatgttccaccagaatatttaattaat
gcaggaatcagggataaattggcgacaatgaaattcagtagatacaaagatgacttgtta
ttttacctattttatacatatgttggagatttaatgcaacttattgcggcggcagaatta
tatgaaagagattggcgatatcatacggacgaaaaagtttggctcactctcattcctgga
atggacaacacttattatttttttgatccccagaactggagaaaagtagccaaagaattt
catttagattgtacaaaattagaagctcggccaaacttgcaaacattaggagcgcagcaa
cctgtgcagtga
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