Primulina huaijiensis: 140956378
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Entry
140956378 CDS
T11038
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phua03009
]
140956378
Enzymes [BR:
phua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140956378
Ribosome biogenesis [BR:
phua03009
]
Eukaryotic type
90S particles
Helicases
140956378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
nSTAND3
ATPase
Motif
Other DBs
NCBI-GeneID:
140956378
NCBI-ProteinID:
XP_073269204
LinkDB
All DBs
Position
13:complement(18154598..18163775)
Genome browser
AA seq
1408 aa
AA seq
DB search
MYSLLDFTVLSLVCSLHPNPAIPFNCSASSLQFPSQIKISTDSELSSLEHSAAAPSVSPP
CISKGCSNFPLLWVSVFYDLHSRFRNKTHSNIRARVLMMLQLDNLDLGTDLTRAEYGGGD
IIMLPGKKKKEKRVKKQVPNRMMNKPKELSKSQKRKLKKLEEDKEKETLLEKSIDTLERY
KIRDDVYSLMRSSRNLGQVETALEKRRREANFLKAGLELAESDRPLKKRTSDDPSFHVEQ
CENILMPQPTNGLSNLKRSTAEKEAMHDATVSAKKMVNETIESSRTELSQKPFPSSCSHE
EIIKLKPVDTLHMDPKNSLAGPSNQDNCYFVRSLCTPTVVHVSRPKEVEMTRRDLPIVMM
EQEIMEAINDHSSVIICGETGCGKTTQVPQFLYEAGFGPNHVHTRRGIIGVTQPRRVAVL
ATAKRVAFELGLRLGKEVGFQVRHDRRIGDNCSIKFMTDGILLREVQNDFLLKRYSVIIL
DEAHERSLNTDILIGMLSRVIKERQREFEEQHKRIISGETIEFENRIYPLKLVLMSATLR
VEDFVSERRLFHDPPPIIEVPTRQYPVTMHFSKRTEIVDYIGQAFKKVMSIHKKLPPGGI
LVFVTGLREVEYLCRKLRRSNETFSVNEEKPSEEIDMKEITDAFDCQGDFGDETPDHFSV
HMEENHGNLLEDEYDNTYNSSEESDLEFYSDDENYSKSMSAESDGKLVNILGVDGGIDSL
KAAFEALARKNGPLPDNTTQNVTKTLEGGPNQSSYIAEKSVGDKVFCTGALRVLPLYAML
PAPAQLRVFEEVKEEERLVVVATNVAETSLTIPGIRYVVDTGREKVKIYNSSNGMESYEI
QWISKASAAQRAGRSGRTGPGHCYRLYSSAVFNNMFPDFSSAEILKVPVDGVVLLMKSMH
IGKVANFPFPTPPETNDLVEAENCLKVLEALDSNGRLTPLGRAMAHYPMNPRHSRMLLTV
IQTMQKVKDSSRASIVLGYAVATAAALSLSNPFITQFEGSHIDTNDSKHAEKDGSVESEN
IRDKGEKARRKKLKEIAKASREKFCNPTSDALTIACALQCFELSENPVEFCSESALHYKT
MEEMSKLRKQVLQLVFSSSTSDLQRDFLWTHGTLKDVECSWKIPSNKHHLLLNEDILAQA
ICAGWADRVARRIKAASVVLDGERKVKSVRYQACMVKETVFLHRWSSVSKSPPEFLVYND
LLYSKRPFIHGATSVRSNWLLKYAQPLCSFSAPLSDPKPYYDPITDQVLSWVTPTFGPHL
WQLPLHGLPIKDNFNRVVVFACSLLEGQVLPCLKAVRKYLAVPPSSILKPEALGLKRVAN
LLSKMSLRGRVIDSCTKLRNLWNENPAELFPEIRDLFQEGFHMQFEELWVEMLHQINLDQ
EERFPVRAKGEKRKKLDFPVIKPIFVCP
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtttacttgactttacagttttatccctcgtgtgctcgttacatcctaaccct
gccatccccttcaattgcagtgcctcttctcttcagtttccctctcaaatcaaaatatca
acagattcagaactttcatcattagagcatagtgctgcggcgccctcagtatctccccct
tgcatctccaaaggttgctccaattttcctttgttgtgggtatctgtattttatgattta
cacagtcgtttccggaacaagactcatagtaatattcgggctcgggtgttaatgatgctg
cagttggataatctggacctgggaacagatttgacgagggcggaatatggtggtggagat
attatcatgttaccaggaaagaaaaagaaagaaaagagggtgaaaaagcaggtacccaac
cgcatgatgaataagcctaaggagctaagcaaatcccagaaaagaaagttaaagaagctt
gaggaggacaaagagaaggaaacgcttctcgagaaaagcatcgatactttagagaggtac
aagattcgagatgatgtttattcccttatgcggtcttcaaggaatttgggtcaggttgaa
acagctcttgaaaagcgtaggagggaagccaactttttgaaagcaggtttagaattggcg
gagagtgatcgaccattaaagaagaggaccagtgatgatccatcttttcatgttgaacaa
tgtgagaatattttaatgccacaaccaaccaacggcctgagcaatttgaagcggtcaaca
gcagaaaaggaggcgatgcatgatgctactgtttcagccaagaaaatggttaacgagact
attgaatcatctaggacagaactttcacaaaaaccttttccttcaagttgcagccatgaa
gaaattattaagctaaagcctgtggatacactgcacatggatccaaaaaacagtcttgct
ggtccaagtaatcaagacaactgttattttgtaagaagtctctgtactccaaccgtagtg
catgtgtcaaggccaaaggaggtggaaatgacaagaagggatcttcctattgtcatgatg
gaacaagaaataatggaagctattaatgatcacagtagcgttattatatgtggtgagact
ggttgtggtaagaccacccaagttcctcagtttctttatgaggctggttttggtccaaac
catgtgcacactcgtcggggaattattggcgtcacccaacctcgccgagttgcagtgctt
gcaactgctaagcgtgtggcttttgagcttggtcttcgtttgggtaaggaagtaggtttt
caagttagacatgacagaaggattggagataattgctcaatcaagttcatgacagatgga
atcttgcttcgagaagtgcagaatgattttctattgaagcgctactctgttataattttg
gatgaggcacatgagagaagtttgaatacagatatactcatcgggatgctttctcgagtt
atcaaagagcgtcaaagggaattcgaggagcaacataagagaattatttcaggggaaact
attgaatttgaaaataggatatatccgttgaaacttgttctaatgagtgcaacactgcgg
gtagaagattttgtgtctgagagaagactttttcatgaccccccgcctattattgaagtt
ccaactcgacagtatccagtcaccatgcatttctcaaagagaacagagattgtagattat
attggtcaagcttttaaaaaagttatgtcaattcacaagaaactaccacctggtggcatt
cttgtttttgtgacaggactgagagaagtagaatacctttgtcggaagttacgtaggtct
aacgagacattttctgtaaatgaagagaaaccttctgaagaaattgatatgaaagagatc
actgatgcatttgattgtcaaggagattttggtgatgagactcctgatcattttagcgtt
cacatggaagagaatcatggcaacttattggaagatgaatatgataacacctataattca
agtgaagagagtgatctggaattttatagcgatgatgagaattattcaaaatcgatgtct
gctgaatctgatggtaagcttgtgaatattttgggagtggacggaggcattgattctttg
aaggctgcttttgaagccttggccaggaaaaatggtcctttaccggacaatacaacccaa
aatgttaccaaaacacttgaaggaggcccaaaccaatctagttacattgctgagaaaagt
gtgggggacaaggttttttgtactggtgcacttcgggttctgcccctttatgccatgctt
cctgcaccagcccagcttcgtgtatttgaagaggtaaaggaagaagagcgtcttgttgtt
gttgcaactaatgtggctgagacctctttgaccattcctggaataaggtatgttgttgac
actggaagggagaaggtcaaaatatacaactcttcaaatggtatggaaagttatgagata
cagtggataagtaaggcttctgcagctcagcgtgctgggagatctggaagaactggacct
ggacactgttatcgcctatattcttctgcagtcttcaacaatatgtttccggacttctca
agtgctgaaatattaaaagttccggttgatggtgttgtcctgcttatgaaatccatgcat
attggcaaagtggctaattttcctttccctacacctcctgagaccaatgatttggttgaa
gcagagaattgtttgaaggttcttgaggcactagattcgaatggaagattgacccctcta
gggagagctatggctcactatcctatgaatcctcgtcattccagaatgctcctcactgtt
attcaaactatgcaaaaggtgaaagatagtagtcgagcaagtatagttttgggctatgca
gttgcaacagctgcggcgttgagcttgtcaaatcctttcatcacgcagtttgaaggaagc
catattgatacaaatgattcaaagcatgccgagaaagatggttctgttgaaagtgagaac
atccgtgacaaaggagagaaggcaaggagaaagaaattgaaagaaatcgccaaagcttct
cgtgaaaagttttgtaacccaacaagcgatgctttgaccattgcctgtgcacttcagtgt
tttgaactttctgaaaatccggttgagttctgcagtgagagtgctttacactataaaacc
atggaagaaatgtccaagctgagaaaacaggttcttcaactagttttcagctcaagtacg
agtgatctgcagcgagactttttgtggacccatggtactctcaaggatgtggaatgttct
tggaaaattccctcaaataaacatcatcttttgctaaatgaggacatcttggctcaggct
atttgtgccggttgggctgatagggttgctaggcgcattaaagcagcttctgttgtgtta
gatggagagagaaaagttaaatcagtaaggtatcaagcttgcatggtcaaagaaacagtt
ttcctccatcgttggtcgtctgtctctaaatctccccctgaatttttggtttacaatgat
ttactgtatagtaaacgaccatttattcacggtgcaacaagcgtgaggtcaaattggctt
cttaagtatgcccagccactctgtagtttctctgcacccctttctgatccaaaaccatat
tatgacccaataaccgatcaggtcttgtcttgggtgactcctacctttggtccccatctg
tggcagcttcctctgcatggtttacccatcaaagacaattttaatcgagtggtggtgttt
gcttgttctttactcgaagggcaagttttgccatgcctaaaggctgtccgtaaatactta
gctgtcccaccttcaagcattttgaaaccagaagcattgggccttaaacgggtggcaaat
ttgttaagcaaaatgagtttgagaggaagagtcattgacagttgtactaaattaagaaat
ttgtggaatgaaaatccagcagagttgtttcctgaaattagagatttatttcaggaagga
ttccatatgcagtttgaagaactctgggttgagatgctccatcagatcaacttagatcag
gaagaaagattccctgttagagccaagggggagaaaaggaagaaattggactttccggta
ataaaaccgatatttgtgtgtccatga
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