Primulina huaijiensis: 140956459
Help
Entry
140956459 CDS
T11038
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
phua Primulina huaijiensis
Pathway
phua03013
Nucleocytoplasmic transport
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140956459
09122 Translation
03013 Nucleocytoplasmic transport
140956459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140956459
03041 Spliceosome [BR:
phua03041
]
140956459
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140956459
Spliceosome [BR:
phua03041
]
Complex C
Other components
EJC/TREX
140956459
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140956459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
140956459
NCBI-ProteinID:
XP_073269288
LinkDB
All DBs
Position
14:13520834..13531621
Genome browser
AA seq
614 aa
AA seq
DB search
MEKFASDLFRKAILNPAPPRDFALQTVQQAIKPQKQMKLVQDENQLLENILRSLLQELVS
AAVQSGEEIMQYGKLIDCEDSNQGQIPRLLDIVLYLCEKDHVEGGMIFQLLEDLTEMSTM
RNCKDTFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHF
FPLSERSAVNIKGVFNTSNETKYEKEAPDGSSIDFNFYKTFWSLQDFFSNPASLTPVITK
WHKFASSLTVVLNTFEAQPLNDEEDNSIDLDEGASNFSIKYLTSSKLMGLELKDPSFRRH
ILVQCLILFDYLKAPGKNDKDLPSDAMKEEMKTCEERVKKLLEMTPPRGKEFLHSIEHIL
EREKNWVWWKRDGCPPFEKQPIEKKLAQDGGKKRRPRWRLGNKELSQLWKWADQNPNALT
DPLRVRTPDIMDYWKGLADDMDDAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTE
HGVEGVVPLELLTPEVRSKYQAKPGDRSKRAKKEEAKNSLQQTESTQIETHTSETDVEGT
RDDPEASVTLVDADATIASGNLSQGGTPTPDEMSKQNWDTDGGQELGQIEADTEVEPGMV
DGDMDAEVDLDVTA
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtttgcatcggatttattcaggaaagcaatactgaatccggctccgcctcgg
gatttcgctcttcagacagtgcaacaagctataaaaccccagaagcaaatgaaactggtt
caggatgaaaatcagcttttggaaaatatcctccggtctttgcttcaggagctggtgtca
gccgccgttcagtcaggcgaggaaatcatgcaatatggaaaattgattgattgtgaggat
agcaatcagggtcaaattccccgccttcttgatatcgttttgtatctttgtgagaaagac
cacgtcgaaggtggcatgatatttcagctcctagaagatttgacagaaatgtctacaatg
agaaactgtaaagatacatttgggtatatagagagtaaacaagacattcttgggaagcca
gagctttttgcaagagggaagcttgtaatgctgagaacgtgcaatcaactccttcgtcga
ttatcgaaggcaaatgatgttgtcttctgtggacgaattataatgtttcttgcccatttt
ttccctttatcggaacgatctgctgtcaatattaaaggagttttcaatacatcaaatgag
acaaaatatgagaaagaagctccagatggtagttctatcgatttcaacttttacaaaacc
ttttggagtttacaggacttcttttccaatcctgcttctcttactcctgttattacaaag
tggcataaatttgcttctagtttgacggttgtgctgaacacatttgaggctcaacctttg
aatgatgaagaggataattctattgaccttgatgagggggcatcaaatttcagtataaaa
tatcttactagcagtaagctaatgggcctcgagttgaaggacccaagttttcgtagacat
atcctggttcaatgccttattttgtttgattacctcaaggctcctgggaaaaatgacaaa
gacttaccatctgatgcaatgaaggaagagatgaaaacttgtgaagagcgggtcaagaag
cttctagaaatgacacctcctagaggaaaagagttccttcatagcattgagcatattctt
gaacgtgaaaaaaattgggtctggtggaagcgtgatggctgccctccgtttgaaaaacaa
ccgatagaaaaaaagctagctcaagatggaggcaagaagcgtcggcctcggtggagactg
ggaaataaggaactctctcaattgtggaaatgggcagatcaaaatccgaatgctttgaca
gatcctctacgagttcggactcctgacatcatggattactggaaagggttggctgatgat
atggatgatgctgcggggattgaagcagaatatcatcacaaaaataatcgagtctattgc
tggaaaggtttaaggttttcggctcggcaagatttggagggattttctaaattcacagaa
catggcgtggagggtgttgtgcctttggaacttctgacgccagaggtgcggtccaaatat
caagctaaaccaggtgatcgatccaagcgagccaagaaggaagaagcaaaaaactccttg
cagcaaacagagagcactcagattgaaacacacacaagcgagactgatgttgagggaacc
agagacgatcctgaagcctcggtaaccctagtggatgcagatgccaccatagcatcgggg
aacctttcgcagggtgggactccaacgccagacgaaatgtctaagcagaactgggatact
gatggtggtcaggaactaggccagattgaagcagataccgaagttgagccaggaatggtt
gatggtgacatggatgctgaggttgatttagacgtcacggcatga
DBGET
integrated database retrieval system