KEGG   Primulina huaijiensis: 140956459
Entry
140956459         CDS       T11038                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
phua  Primulina huaijiensis
Pathway
phua03013  Nucleocytoplasmic transport
phua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140956459
  09122 Translation
   03013 Nucleocytoplasmic transport
    140956459
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140956459
   03041 Spliceosome [BR:phua03041]
    140956459
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     140956459
Spliceosome [BR:phua03041]
 Complex C
  Other components
   EJC/TREX
    140956459
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    140956459
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 140956459
NCBI-ProteinID: XP_073269288
LinkDB
Position
14:13520834..13531621
AA seq 614 aa
MEKFASDLFRKAILNPAPPRDFALQTVQQAIKPQKQMKLVQDENQLLENILRSLLQELVS
AAVQSGEEIMQYGKLIDCEDSNQGQIPRLLDIVLYLCEKDHVEGGMIFQLLEDLTEMSTM
RNCKDTFGYIESKQDILGKPELFARGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAHF
FPLSERSAVNIKGVFNTSNETKYEKEAPDGSSIDFNFYKTFWSLQDFFSNPASLTPVITK
WHKFASSLTVVLNTFEAQPLNDEEDNSIDLDEGASNFSIKYLTSSKLMGLELKDPSFRRH
ILVQCLILFDYLKAPGKNDKDLPSDAMKEEMKTCEERVKKLLEMTPPRGKEFLHSIEHIL
EREKNWVWWKRDGCPPFEKQPIEKKLAQDGGKKRRPRWRLGNKELSQLWKWADQNPNALT
DPLRVRTPDIMDYWKGLADDMDDAAGIEAEYHHKNNRVYCWKGLRFSARQDLEGFSKFTE
HGVEGVVPLELLTPEVRSKYQAKPGDRSKRAKKEEAKNSLQQTESTQIETHTSETDVEGT
RDDPEASVTLVDADATIASGNLSQGGTPTPDEMSKQNWDTDGGQELGQIEADTEVEPGMV
DGDMDAEVDLDVTA
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagaagtttgcatcggatttattcaggaaagcaatactgaatccggctccgcctcgg
gatttcgctcttcagacagtgcaacaagctataaaaccccagaagcaaatgaaactggtt
caggatgaaaatcagcttttggaaaatatcctccggtctttgcttcaggagctggtgtca
gccgccgttcagtcaggcgaggaaatcatgcaatatggaaaattgattgattgtgaggat
agcaatcagggtcaaattccccgccttcttgatatcgttttgtatctttgtgagaaagac
cacgtcgaaggtggcatgatatttcagctcctagaagatttgacagaaatgtctacaatg
agaaactgtaaagatacatttgggtatatagagagtaaacaagacattcttgggaagcca
gagctttttgcaagagggaagcttgtaatgctgagaacgtgcaatcaactccttcgtcga
ttatcgaaggcaaatgatgttgtcttctgtggacgaattataatgtttcttgcccatttt
ttccctttatcggaacgatctgctgtcaatattaaaggagttttcaatacatcaaatgag
acaaaatatgagaaagaagctccagatggtagttctatcgatttcaacttttacaaaacc
ttttggagtttacaggacttcttttccaatcctgcttctcttactcctgttattacaaag
tggcataaatttgcttctagtttgacggttgtgctgaacacatttgaggctcaacctttg
aatgatgaagaggataattctattgaccttgatgagggggcatcaaatttcagtataaaa
tatcttactagcagtaagctaatgggcctcgagttgaaggacccaagttttcgtagacat
atcctggttcaatgccttattttgtttgattacctcaaggctcctgggaaaaatgacaaa
gacttaccatctgatgcaatgaaggaagagatgaaaacttgtgaagagcgggtcaagaag
cttctagaaatgacacctcctagaggaaaagagttccttcatagcattgagcatattctt
gaacgtgaaaaaaattgggtctggtggaagcgtgatggctgccctccgtttgaaaaacaa
ccgatagaaaaaaagctagctcaagatggaggcaagaagcgtcggcctcggtggagactg
ggaaataaggaactctctcaattgtggaaatgggcagatcaaaatccgaatgctttgaca
gatcctctacgagttcggactcctgacatcatggattactggaaagggttggctgatgat
atggatgatgctgcggggattgaagcagaatatcatcacaaaaataatcgagtctattgc
tggaaaggtttaaggttttcggctcggcaagatttggagggattttctaaattcacagaa
catggcgtggagggtgttgtgcctttggaacttctgacgccagaggtgcggtccaaatat
caagctaaaccaggtgatcgatccaagcgagccaagaaggaagaagcaaaaaactccttg
cagcaaacagagagcactcagattgaaacacacacaagcgagactgatgttgagggaacc
agagacgatcctgaagcctcggtaaccctagtggatgcagatgccaccatagcatcgggg
aacctttcgcagggtgggactccaacgccagacgaaatgtctaagcagaactgggatact
gatggtggtcaggaactaggccagattgaagcagataccgaagttgagccaggaatggtt
gatggtgacatggatgctgaggttgatttagacgtcacggcatga

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