Primulina huaijiensis: 140956944
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Entry
140956944 CDS
T11038
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
phua Primulina huaijiensis
Pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140956944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140956944
03041 Spliceosome [BR:
phua03041
]
140956944
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
140956944
Spliceosome [BR:
phua03041
]
Complex B
Other components
Prp19-related factors
140956944
Complex C
140956944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
TPR_19
PPR
PKI
Motif
Other DBs
NCBI-GeneID:
140956944
NCBI-ProteinID:
XP_073270021
LinkDB
All DBs
Position
14:14078592..14084334
Genome browser
AA seq
912 aa
AA seq
DB search
MVISQELYPSEEDYLYEEEVLRNPNNVKLWWRYLIARGEAPFRKRAIIYERALKALPGSY
KLWHAYLRERLELVRNLPINHAQYQTLNNTFERALATMHKMPRIWMMYLQSLTRQKLITK
TRHTFDRALCALPVTQHDRIWEYYLVFVSQKGVPVETSLRVYRRYLKYDPSHIEDFIEFL
VNSELWQEASERLAGVLNDDRFYSLKGKTKHRLWLELCDLLTQHASEVSGLNVDAIIRGG
IKKFTDEVGRLWTSLSDYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMENMDLSDDEDDKENENEEKEEEEEDDRLDFEKLKKRIDTFWLKDDKDVDLRLARLE
HLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYESHRDVANARVIFDKAVQVNFKAVDHLASVWCDWAEMELRHKNFKGALDL
MRRATAEPSVEVKRRVAADGNKPVQIILHRSLKLWTFYVDLEESLGSLESTRAVYERILD
LRIATPQIIINYSMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYNQATKAVPANEKMGMY
EIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRSRALYKHA
SQFADPRSDPDFWNKWHEFEVQLGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQM
QTLDEAKDVLKKAGVDDDEMAALERQLVPTLNDTKVKDSGRRLGFVSAGMQNEGESLSNR
EDIELPEESDSEDDKVEIAQKDVPTAVFGGLVRKREESEEDVEAPDSTITESKDNDAHLG
ALERIKRMRRGA
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggtgatatcacaggagttgtatccaagtgaagaggactacctgtatgaagaagaagtg
ctccgcaaccctaacaacgtcaagctgtggtggcggtatttaattgcccgcggagaagca
cctttccgaaagcgtgccattatttatgagcgtgctctcaaggcattgccaggaagctac
aagctttggcacgcgtatctccgggaacgccttgagctggttaggaatctgcctatcaat
cacgcacagtaccaaaccttgaacaacacgttcgagcgagctctggctacaatgcataag
atgccccgcatttggatgatgtatttgcagtcgttgactcggcagaagttgattaccaag
acacggcacacgtttgatagagctttgtgcgctctcccagttacgcaacatgataggatt
tgggaatattatttagtctttgtttcgcagaagggtgtacctgttgaaacttctctgaga
gtgtacaggaggtacttgaagtatgatccgagtcatatcgaggattttattgagtttttg
gttaattcagagttgtggcaggaagcctcggagaggttggcaggggttttgaatgacgat
cggttttactctttaaaggggaagacaaagcacaggttgtggctggaattgtgcgatctg
ctgacacaacatgctagtgaggtgtcagggttgaatgtggatgcaataattaggggtgga
attaagaagtttacagatgaggttggaagactttggacatcattgtcggattattatatt
aggaggggtttactggagaaggccagggatatttttgaggaagggatgactacagtgatt
acagtgagagactttagcgttatatttgatgcttattctcagtttgaagagagtatgtta
tccattaagatggaaaatatggatcttagtgatgatgaggatgacaaggagaatgaaaat
gaagagaaggaagaagaagaggaggatgacaggttggattttgagaagttgaagaagaga
atcgacacattttggttgaaagatgataaggatgtggatttgaggttggcaaggttggag
catctgatggataggagaccagagttagctaacagtgtgctcttgagacagaatcctcat
aatgtagagcagtggcaccggagagttaagctctttgaagggaaccccacaaagcaaatt
cttacttacacggaggcagtgaggacagtagatccaatgaaggctgttgggaagccacat
actttgtgggttgcatttgctaagttgtacgagagtcaccgagatgttgctaatgcccgg
gtgatttttgacaaggcagtgcaggtcaattttaaggctgtggaccatctggccagtgtt
tggtgtgattgggcggagatggagcttaggcacaaaaattttaagggcgcactagatttg
atgcgtcgagctaccgcagagccatcagttgaggtcaagagaagagtggctgctgatggc
aacaagccggtgcaaattatacttcacaggtctcttaaactttggacgttctatgtggat
ttggaggaaagcttgggcagcctggagtcaactcgtgcagtttacgaaagaatattggat
ttgagaatagccacaccccaaattattataaactattcaatgctcttagaagacaacaag
tactttgaagatgcttttaaggtttatgagagaggtgtgaagattttcaaatacccccat
gtgaaagatatctgggtcacttacctttcaaagttcgtcaagagatatgggaaatcaaaa
ctagaacgagctcgagagttatttgagcatgctgttgaaatggcacctgcagaagcagtg
aaacctctgtatcttcaatatgcaaagctagaagaagactttggtctggctaaaagagca
atgagagtatacaatcaggcaacaaaagctgtccctgctaatgagaaaatgggcatgtat
gaaatatacattgcccgtgctgctgaaatatttggcgtaccaaaaacgagagagatttat
gagcaagcaatagaatctggcctcccagacaaagatgtcaaggttatgtgtttgaagtat
gcagaacttgagaaaagccttggagaaattgaccgcagtcgtgcattatataaacacgct
tcacagtttgccgaccctagatctgaccccgacttctggaataaatggcacgaatttgaa
gtgcagcttgggaatgaagatactttccgagagatgctccgagttaaaagaagtgtttct
gcaagctatagccagacacactttatccttccagagtatttgatgcaaaaggatcagatg
cagacccttgatgaggcaaaggatgtacttaagaaagctggtgtagatgatgatgaaatg
gctgcccttgaaaggcagttagtccctactctcaatgataccaaagtgaaagatagtggt
agacgactaggatttgtcagcgctgggatgcaaaatgaaggtgagtccctatcaaatagg
gaggatatagagcttccagaagaaagtgattctgaagatgataaggttgagatagcccaa
aaagatgttccaacagccgtatttggaggtctggtgcggaaaagggaagaatctgaggaa
gacgtggaagctcctgattcaactattactgaaagcaaagataatgatgcccatcttggt
gctttggagagaataaaaaggatgaggcgaggcgcatag
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