KEGG   Primulina huaijiensis: 140956944
Entry
140956944         CDS       T11038                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
phua  Primulina huaijiensis
Pathway
phua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140956944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140956944
   03041 Spliceosome [BR:phua03041]
    140956944
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140956944
Spliceosome [BR:phua03041]
 Complex B
  Other components
   Prp19-related factors
    140956944
 Complex C
    140956944
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_19 PPR PKI
Other DBs
NCBI-GeneID: 140956944
NCBI-ProteinID: XP_073270021
LinkDB
Position
14:14078592..14084334
AA seq 912 aa
MVISQELYPSEEDYLYEEEVLRNPNNVKLWWRYLIARGEAPFRKRAIIYERALKALPGSY
KLWHAYLRERLELVRNLPINHAQYQTLNNTFERALATMHKMPRIWMMYLQSLTRQKLITK
TRHTFDRALCALPVTQHDRIWEYYLVFVSQKGVPVETSLRVYRRYLKYDPSHIEDFIEFL
VNSELWQEASERLAGVLNDDRFYSLKGKTKHRLWLELCDLLTQHASEVSGLNVDAIIRGG
IKKFTDEVGRLWTSLSDYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMENMDLSDDEDDKENENEEKEEEEEDDRLDFEKLKKRIDTFWLKDDKDVDLRLARLE
HLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYESHRDVANARVIFDKAVQVNFKAVDHLASVWCDWAEMELRHKNFKGALDL
MRRATAEPSVEVKRRVAADGNKPVQIILHRSLKLWTFYVDLEESLGSLESTRAVYERILD
LRIATPQIIINYSMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYNQATKAVPANEKMGMY
EIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRSRALYKHA
SQFADPRSDPDFWNKWHEFEVQLGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQM
QTLDEAKDVLKKAGVDDDEMAALERQLVPTLNDTKVKDSGRRLGFVSAGMQNEGESLSNR
EDIELPEESDSEDDKVEIAQKDVPTAVFGGLVRKREESEEDVEAPDSTITESKDNDAHLG
ALERIKRMRRGA
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggtgatatcacaggagttgtatccaagtgaagaggactacctgtatgaagaagaagtg
ctccgcaaccctaacaacgtcaagctgtggtggcggtatttaattgcccgcggagaagca
cctttccgaaagcgtgccattatttatgagcgtgctctcaaggcattgccaggaagctac
aagctttggcacgcgtatctccgggaacgccttgagctggttaggaatctgcctatcaat
cacgcacagtaccaaaccttgaacaacacgttcgagcgagctctggctacaatgcataag
atgccccgcatttggatgatgtatttgcagtcgttgactcggcagaagttgattaccaag
acacggcacacgtttgatagagctttgtgcgctctcccagttacgcaacatgataggatt
tgggaatattatttagtctttgtttcgcagaagggtgtacctgttgaaacttctctgaga
gtgtacaggaggtacttgaagtatgatccgagtcatatcgaggattttattgagtttttg
gttaattcagagttgtggcaggaagcctcggagaggttggcaggggttttgaatgacgat
cggttttactctttaaaggggaagacaaagcacaggttgtggctggaattgtgcgatctg
ctgacacaacatgctagtgaggtgtcagggttgaatgtggatgcaataattaggggtgga
attaagaagtttacagatgaggttggaagactttggacatcattgtcggattattatatt
aggaggggtttactggagaaggccagggatatttttgaggaagggatgactacagtgatt
acagtgagagactttagcgttatatttgatgcttattctcagtttgaagagagtatgtta
tccattaagatggaaaatatggatcttagtgatgatgaggatgacaaggagaatgaaaat
gaagagaaggaagaagaagaggaggatgacaggttggattttgagaagttgaagaagaga
atcgacacattttggttgaaagatgataaggatgtggatttgaggttggcaaggttggag
catctgatggataggagaccagagttagctaacagtgtgctcttgagacagaatcctcat
aatgtagagcagtggcaccggagagttaagctctttgaagggaaccccacaaagcaaatt
cttacttacacggaggcagtgaggacagtagatccaatgaaggctgttgggaagccacat
actttgtgggttgcatttgctaagttgtacgagagtcaccgagatgttgctaatgcccgg
gtgatttttgacaaggcagtgcaggtcaattttaaggctgtggaccatctggccagtgtt
tggtgtgattgggcggagatggagcttaggcacaaaaattttaagggcgcactagatttg
atgcgtcgagctaccgcagagccatcagttgaggtcaagagaagagtggctgctgatggc
aacaagccggtgcaaattatacttcacaggtctcttaaactttggacgttctatgtggat
ttggaggaaagcttgggcagcctggagtcaactcgtgcagtttacgaaagaatattggat
ttgagaatagccacaccccaaattattataaactattcaatgctcttagaagacaacaag
tactttgaagatgcttttaaggtttatgagagaggtgtgaagattttcaaatacccccat
gtgaaagatatctgggtcacttacctttcaaagttcgtcaagagatatgggaaatcaaaa
ctagaacgagctcgagagttatttgagcatgctgttgaaatggcacctgcagaagcagtg
aaacctctgtatcttcaatatgcaaagctagaagaagactttggtctggctaaaagagca
atgagagtatacaatcaggcaacaaaagctgtccctgctaatgagaaaatgggcatgtat
gaaatatacattgcccgtgctgctgaaatatttggcgtaccaaaaacgagagagatttat
gagcaagcaatagaatctggcctcccagacaaagatgtcaaggttatgtgtttgaagtat
gcagaacttgagaaaagccttggagaaattgaccgcagtcgtgcattatataaacacgct
tcacagtttgccgaccctagatctgaccccgacttctggaataaatggcacgaatttgaa
gtgcagcttgggaatgaagatactttccgagagatgctccgagttaaaagaagtgtttct
gcaagctatagccagacacactttatccttccagagtatttgatgcaaaaggatcagatg
cagacccttgatgaggcaaaggatgtacttaagaaagctggtgtagatgatgatgaaatg
gctgcccttgaaaggcagttagtccctactctcaatgataccaaagtgaaagatagtggt
agacgactaggatttgtcagcgctgggatgcaaaatgaaggtgagtccctatcaaatagg
gaggatatagagcttccagaagaaagtgattctgaagatgataaggttgagatagcccaa
aaagatgttccaacagccgtatttggaggtctggtgcggaaaagggaagaatctgaggaa
gacgtggaagctcctgattcaactattactgaaagcaaagataatgatgcccatcttggt
gctttggagagaataaaaaggatgaggcgaggcgcatag

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