Primulina huaijiensis: 140956984
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Entry
140956984 CDS
T11038
Name
(RefSeq) cleavage stimulation factor subunit 77-like isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
phua Primulina huaijiensis
Pathway
phua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140956984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140956984
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
140956984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_15
TPR_2
TPR_16
TPR_CcmH_CycH
Iml2-TPR_39
Motif
Other DBs
NCBI-GeneID:
140956984
NCBI-ProteinID:
XP_073270103
LinkDB
All DBs
Position
14:complement(19937003..19948132)
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AA seq
768 aa
AA seq
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MSNGTAESKSTTLSGWKLKDNETQDNIMSDKYNAEAAEALANEALRLPISEAVPIYEQLL
TTFPTAAKFWKQFIEAHMAVNDDEATRQVFSRCLLNCLQVPLWRCYIRFIRKVNDKRGID
GQEETKNAFDFMLNYVGADIASGPVWLEYIAYLKSLPAQRTLEESQRMTLIRKTYQRAIV
LPTHHVEQLWRDYESFENSVSRALAKGLLSEYQPKYNSAKAVYRERKKYVDEIDWNMLAV
PPSGSPKEEMQWMAWNKLLSFEKGNPQRIDNASANKRIAFAFEQCLMYLYHYPDIWYDYA
QWHAKSGSTDSAVKVFQRALKALPDSEMLKYAYAELEESHGAIQAAKKVYELLLGDGLNA
TALSHIQFIRFLRRTEGVEAARKYFLEARKSPSCTYHVYVAYAMMAFCLDKDSKVAHNIF
EAGLKRFMHEPGYILEYADFLCRLNDDRNIRALFERALSSLPPDESVEVWKRFSQFEQTY
GDLASMLKVEQRRKEALSRMGEDGESVLESSLQDVLSRYSFMDLWPCSAKDLDHLTRQEW
LSKNIKKKIEIHVPPNGASSSDRSISGTPNVSNYLGKIVYPDTSRMVIYGPTQRPGTAAP
VLPGVPSTLLGNTLNNGGALNPLNGSIKVLPPALLNFAANLPAVDGPSPDVDFVISICLQ
SDLTSATAVSVARPQLQVGSAPSTSNISGSNNYKQGGRLSGKRKDSERQEDDDTSTTQSQ
PLPRDAFKIRQLQKARVTSSRGGGGSVSYGGSASYGSGFSGDLSASSG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgggaccgcagaatcaaaatctacaactctctctggctggaagttgaaggat
aacgagacacaagacaacattatgtctgataagtacaacgctgaagccgctgaagctctt
gcaaatgaggcattgcgtctgccaatctcagaagcggtgcccatatatgagcaactcttg
accacattccccacagcggcaaaattttggaagcagtttatagaagcacacatggctgtg
aatgatgatgaagcaaccagacaagtatttagtcgttgccttctgaattgtttgcaagtt
cctctttggcgctgctacatccgcttcattaggaaagttaatgacaagaggggaatagat
ggccaggaagagacaaaaaatgcatttgatttcatgcttaattatgtcggggctgacatt
gcatctggtcctgtgtggttggaatatattgcatatttaaaatccttgccggcacaaaga
actctagaggaatcgcaaaggatgactttgatacgcaagacataccaaagggctatcgtt
ttgcctactcatcatgttgaacagctctggagggactatgagagttttgaaaattcagtt
agccgtgctctggcaaaagggttgttgtctgaatatcaaccaaaatataacagtgcaaag
gctgtttacagggagcggaagaaatatgtagatgaaattgattggaatatgctagctgtt
cctccttctggttctcctaaggaggaaatgcaatggatggcatggaataagttattaagc
tttgagaaaggcaacccccagaggattgataatgcttctgcaaataaaagaattgcattt
gcttttgagcagtgcctcatgtatttatatcattaccctgatatatggtacgactatgcc
caatggcatgcaaaaagtggttccacagactctgcagttaaagttttccagcgagcactg
aaggctcttcctgattcagaaatgctaaagtatgcctatgctgagctagaagaatctcat
ggagcaattcaggctgcaaagaaggtttatgagctcctccttggggatggtttgaatgca
acagctttatcacatatccagttcatacgatttcttagaagaaccgaaggagtggaggca
gctcgcaaatactttctggaggctcggaaatctccaagttgcacttaccatgtgtatgtt
gcatatgccatgatggccttttgtcttgataaggactccaaggttgcacacaatattttt
gaagcaggtctaaaacggtttatgcatgagcctggctatattcttgaatatgctgatttc
ttgtgccgtttgaatgatgatagaaatattcgtgctttgtttgaaagagctttgagctcg
ctcccaccagatgaatctgttgaggtttggaaacgatttagccagtttgagcaaacgtat
ggagatcttgccagcatgttaaaggttgaacaaagaaggaaagaagcattgtctcgtatg
ggagaggatggagaatccgttttggagagttctctgcaagatgttttatcacgttatagt
tttatggatctgtggccatgctcagccaaagacttggatcatttaactcggcaagagtgg
ctctctaagaatatcaagaagaagattgaaattcacgttcctcctaatggagctagttct
tcagataggagcatttcgggaactccaaatgtttcaaattaccttgggaagattgtgtat
ccagatacatcaagaatggtgatttatggtccgactcagaggcctggaactgctgcccct
gtgcttcctggagtcccaagcacgttacttggtaatacgttgaataatggaggagcatta
aatccgttgaatggcagtattaaagttttgcctccggcattattgaactttgctgcaaat
ttgccagctgttgatggcccatctcctgatgttgactttgtgatatccatatgtttgcaa
agcgatttaacttcagcaactgcggtatctgtggcgcgtccacagttgcaagttggatct
gctccaagtaccagcaacatatctggttcgaacaattataagcaggggggcagactttct
ggaaaaagaaaagattctgagaggcaagaagatgatgacacttctactacacaaagccaa
ccgttacctagagatgctttcaagattcggcaattgcagaaagctcgggtaaccagttca
cgaggaggtggcggatctgtatcatatggtggttctgcttcatatgggagtggtttttcc
ggtgacctttctgcaagctctggttaa
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