Primulina huaijiensis: 140957533
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Entry
140957533 CDS
T11038
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
phua Primulina huaijiensis
Pathway
phua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140957533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140957533
03036 Chromosome and associated proteins [BR:
phua03036
]
140957533
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
140957533
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
140957533
PBAF complex
140957533
GBAF(ncBAF) complex
140957533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
140957533
NCBI-ProteinID:
XP_073270946
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All DBs
Position
14:1871717..1874328
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AA seq
540 aa
AA seq
DB search
MDNHNIHKNHNPVRGNFGFGNPVGKQMQIPMQMPLNHNQQQVPQMLPQNQPQARPYFPGH
FQPSEPQAQAFAQGQTVQVHTQAQFMATQPQGHNNISISSPSVSTPGSGGAGTGKRLHKP
PSRPSGGLSAQGTASPMKTMELTPAAHRGKRKVPDKAIPDKVAAIVPESALYTQLVEFES
RVDAALTRKKVEILEALKNPVRAQKILRVYLFNTYANQAQTDSVKENAEPPSWTLRMIGR
ILEDGKDPALEGQVQKSSCSYPKFSTFFKKITIYLDQNLYPDNNVILWESSRSPVLHEGF
EVKRKGDKEFTAIIRLEINYCPEKFKLSQALHEVLGIEVDTRPRIIAALWHYVKTRKLQI
PGDSSSFMCDSPLRKVFGEDKLKFSMVMQKITPHLIPPGPIHIEHKIKLSGGSPAGNTCY
DVLVDIPWTLEREMSNFLANIEKNKEIENCDESISSAIKKIHEHRRRRAFFLGFSQSPGE
FINSLIASQARDLKLASLDTNRDVEKERQAEFYHQPWIEDAVIRYLNRKTAAGSEAPGSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggataatcataatattcataaaaaccacaaccctgtgaggggaaatttcggttttggg
aatcctgtaggaaagcaaatgcaaattccgatgcagatgcccttgaatcataaccagcaa
caggtaccccagatgctgccccagaatcagcctcaagctaggccctactttcctggacat
tttcaaccatcagaacctcaggcgcaggcgtttgcgcagggccaaacagttcaagtccac
actcaagctcagttcatggcaacccagcctcagggccacaataacatcagcatttcctca
ccatctgtgtccactcctgggtctggaggggcaggaacagggaagcgcctgcacaaacca
ccttctcggccttctgggggattatcagctcagggaactgcttccccaatgaaaaccatg
gaactgaccccagctgcacatagagggaagcggaaggttccggataaagctattcctgat
aaagttgcagcgatagtgccagaatctgctctttatactcaattggttgaatttgagtct
cgtgtagatgctgcccttacgaggaaaaaggttgagatattagaagcccttaaaaatcct
gtacgtgctcagaagatcctacgtgtatatttgttcaacacatatgcgaaccaggcacaa
acagattccgtgaaggaaaatgctgaaccaccttcttggacactcaggatgattgggaga
attttagaagatggcaaagatcccgctttggaaggacaagtgcagaaatcaagctgttcc
tacccaaagttttcaaccttcttcaagaaaattactatttacttggatcaaaatctgtat
ccagataacaacgtaatactttgggagagttctcgatcaccagtgcttcatgaggggttt
gaggtgaagaggaaaggagacaaggaattcactgcaattattagattggagattaattat
tgccctgaaaagtttaaactttcacaagctttgcatgaagttcttggcattgaggtggat
acccgacctagaattattgcagcactttggcactatgtgaaaactagaaaattacaaata
cccggtgactcttcctccttcatgtgtgattcacctcttaggaaagtgtttggagaagac
aagttgaaattttccatggttatgcagaagataacacctcatttgattccacctggtccg
atacacatagagcataaaattaagctctctggtggtagtcccgctggaaatacttgctat
gatgtgcttgttgatattccttggacgttagaaagggaaatgtcaaattttttggccaac
atagagaagaacaaggagattgaaaattgtgatgaatcaatttcttctgctataaagaaa
atccatgagcatcgccgaagacgagctttctttcttggatttagtcagtcacctggagag
ttcattaattccttaattgcttctcaagccagggatttgaagcttgcttcactagatacc
aatcgcgacgtggagaaagagcggcaagcagagttttaccatcaaccatggatcgaagat
gcagttatccggtacttaaatcgcaagactgctgctgggagtgaagctcctggaagcaaa
tag
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