Primulina huaijiensis: 140958112
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Entry
140958112 CDS
T11038
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140958112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140958112
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140958112
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140958112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
140958112
NCBI-ProteinID:
XP_073271607
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Position
14:complement(14853741..14855171)
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AA seq
270 aa
AA seq
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MSLLPKSDSIQIRDVWADNLDEELSLIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSGDY
HYQTLKDNVDLLKLIQLGLTFSDDKGNLPTCGSGKYCIWQFNFREFNDNEDVFANDSIEL
LRQSGIDFAKNNEKGIDAKVLGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQSLP
DTQSGFFTLINVYFPVLYDVKHLMKFCNSLHGGLNKLAELLEVDRVGVCHQAGSDSLLTC
CTFKKLKENFFSGSMEKYSGVLYGLGVENG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgcccaaaagcgattcgattcaaatcagggacgtttgggctgacaatttg
gatgaagaattgtcgttgattcgtgaaattgtcgatgattatccttatattgccatggac
accgagttcccggggattgttcttcgtcccgtgggaaacttcaagaactcaggtgactac
cattaccagacattgaaagacaatgttgatctgttgaagctaatccagctaggtctaact
ttttcggatgacaagggaaatctgccgacatgtggtagcggcaagtattgcatttggcaa
ttcaatttccgtgaatttaatgacaatgaggatgtctttgcaaatgattcaatcgagttg
ttgcgacaaagtggtattgacttcgcaaaaaataacgaaaagggtatagatgcgaaggtt
ttgggggagcttttaatgtcttctggtatagttttgaacgacaatgtgtactgggtgacg
tttcacagtgggtatgattttgggtacttgctcaagctcttgacatgtcagagcttgccc
gatacgcagtctgggttctttactttgatcaatgtgtactttcccgtgctttacgatgtc
aaacatttgatgaaattttgcaacagtttgcacggtggtttgaataagttggcggagttg
ttggaggtggacagagttggggtctgtcatcaggcaggttcggatagcttgcttacttgt
tgtacattcaagaagttgaaagagaacttcttcagcggctcgatggagaagtattcgggt
gtgttgtatggtttaggtgttgagaatggatag
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