Primulina huaijiensis: 140958220
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Entry
140958220 CDS
T11038
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140958220
03041 Spliceosome [BR:
phua03041
]
140958220
03036 Chromosome and associated proteins [BR:
phua03036
]
140958220
Enzymes [BR:
phua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140958220
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140958220
mRNA cycle factors
Common to processing body (P body) and stress granule
140958220
Spliceosome [BR:
phua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140958220
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140958220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Mcm-like_N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
140958220
NCBI-ProteinID:
XP_073271695
LinkDB
All DBs
Position
15:6498081..6505057
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AA seq
610 aa
AA seq
DB search
MPTSWADSVDKVPAGDGTGAVSRVKSSYVPPHLRNKPLSSDAPAAPFSYAGVASGNDRQG
HGGQPIGAGYPGGYRNDRSAGITRTGGWNNRSGSWDRGKEREVNPFPDDIDSEEAFTSQE
NTGINFDAYEDIPVETSGRNVPPPVNTFAEIDLGEALNRNIKRCKYVKPTPVQRYAIPIS
IAGRDLMACAQTGSGKTAAFCFPIISGVMKSSQSTPRPPHMPRMSFPLALILAPTRELSI
QIHEEAKKFSYQTGVRVVVTYGGAPINLQLRELERGVDILVATPGRLVDLLERARVSLQM
IRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGIRQTLLFSATFPKEIQRLAADFLSNY
VFLAVGRVGSSTDLIVQRVEYVLETDKRSHLMDLLHAQLANGVHGKQALTLVFVETKKGA
DALEHWLSINGFPATAIHGDRTQQEREYALRCFKSGKTPILVATDVAARGLDIPHVAHVV
NFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNASLAKSLTDLMQEANQEVPAWLSRF
AARSSLYGKNRRGGGGSGGRFGGRDFRRDASFGRGGMEYYGGGQINGGYGSSSSGGHGGG
YGPSVTSAWD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccaacatcatgggccgattcggttgataaggtaccggcaggtgatggcaccggggca
gtttcccgtgtcaaatcaagttatgttccgccgcatcttagaaacaaacctctttcatca
gacgctccagcagctccattttcctacgctggtgttgcgtctggaaatgatcgacaagga
catggtggccaacccataggtgcaggttatcctggtggttatagaaatgatagaagcgca
ggaatcacccgcactggtggatggaataatagaagtggtagttgggatcgcgggaaggag
agagaggtcaatccttttccagatgacattgattctgaagaagcttttacctcacaggag
aatactgggatcaattttgatgcttatgaggatattccggtcgagactagtggtcgaaat
gttcctcctcctgtgaatacatttgctgagattgatttaggtgaagcattaaatcgaaat
attaagaggtgcaaatatgtgaaacccactcctgtgcagcggtatgccataccaatttca
attgctgggcgggatttgatggcttgtgctcagactggatctggaaagacagctgcattt
tgcttcccaatcataagtggagtcatgaaaagcagccaatctactccaagaccacctcac
atgccacgcatgtcatttcctcttgctctcattcttgctcctaccagggagctgtcaatc
caaattcatgaagaagctaaaaaattttcatatcaaactggagtgagggttgttgttact
tatggtggtgcacccataaatctacagcttcgagaacttgaaagaggtgtggacatactt
gtcgccactcctggacgcttggtggatttattggaaagggcaagagtctcattgcaaatg
attaggtatttagccctggatgaggcagatagaatgctggacatgggttttgaacctcaa
ataaggaaaatagtgcagcaaatggacatgcctcctcctggtattagacaaacgttgctg
tttagtgccacatttccaaaagaaatccagaggctagcagcagattttctgtcgaattac
gtgtttttggcagttggaagagttggttctagtactgatctaattgttcaaagggttgaa
tatgtgcttgagacagacaaaagaagtcatttgatggacctccttcatgcacagttggca
aatggtgttcatggcaagcaagctcttacactagtttttgtggaaacaaaaaagggagct
gatgcactcgaacattggcttagcattaatggtttccctgccactgccatccatggtgat
cgaactcaacaggagcgagaatatgctttgagatgtttcaaaagcggtaaaacaccaata
ttggttgcaacagatgtagcagcacggggtctggatatcccccatgttgcacatgtggtc
aattttgatcttccaaacgacattgatgactacgtccaccgtataggccggacaggccgt
gctggaaaatctgggttggcgactgcgttctttaacgagaacaatgcctcactggcgaaa
tcattgactgatttgatgcaagaagccaaccaagaagttccggcttggctttcccgtttt
gcagccaggtcttctttgtatggaaagaatcgtcgcggagggggtggttcgggaggaaga
tttggtggccgtgactttcgtagagatgcctcgtttggtagaggcggaatggagtactat
ggtgggggtcaaattaatggtggatatggcagcagcagctctggtggtcatggtggagga
tatggtcccagtgtgactagtgcatgggactga
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