Primulina huaijiensis: 140958435
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Entry
140958435 CDS
T11038
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phua03036
]
140958435
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phua00535
]
140958435
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140958435
Meiosis-specific proteins
Cohesin complex and associated proteins
140958435
Proteoglycans [BR:
phua00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
140958435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
140958435
NCBI-ProteinID:
XP_073271974
LinkDB
All DBs
Position
15:complement(5106474..5123731)
Genome browser
AA seq
1204 aa
AA seq
DB search
MYIKQVVIEGFKSYREQVATETFSPKVNCVVGANGSGKSNFFHAIRFVISDLFHNLRSEE
RQALLHEGAGHQLLSAFVEIVFDNTDNRIPVDKEEVRLRRTIGVKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKKKQIIQVVQYLDDRLRELDEEKEELKKYQQLDKQRKSLEYTIYDKELHDAKQKLV
EIEEARNIVSETSAKMFNSVSNAHERSKVLDKSLKDLTKETQILSREKEAIEKQRTEAIK
KRAKLELDDRDLHEKIQGNIKAKEDAVKQLVLLDKEIQGSYAELKTINEQYENQVGQEEK
LTRGIMEREKKLSILYQKQGRATQFASKTARDQWLQKEIKDYEQVLSSNRIQERKLRDEI
DLLEKDIREQDAYIKGRKSEAAEFESLISGYRQGYNHYKVERDKLHDERKSLWGRESELS
AEIEQLKSEVVKAEKSLDHATPGDIRRGLNSVRRICRENEIGGVFGPVFELLDCDEKFFT
AVEVTAGNSLFHVVVENDEISTKIIRHLNAQKGGRVTFIPLNRVQAPHVTYPQSSDVVPL
LKKLRFSQDYNSAFAQVFAKTVICRDLDVATRVARTDGLDCITLEGDQVNKKGGMTGGFY
DYRRSKLKFMKTIRENTKSINMKEVELEKVKCKLQEIDQKINELVGEQQRNDAKLAHEKS
VLEQIRQDAMNAERQKQSISKSLEKKEKLLTSISAQIEQNRANISMKEDEMGTELVDHLT
PEDKDLLSRLNPEITKLKEQLITCRSSRMETETRKDELEMNLSTNLVRRKEELEAVKSSG
EIDMLQEEAELKSQDLAYAKSLVDQLTQQLKRASDSIDDRDRKLKEIKVEKENLKNLEDR
YQSTLQDEAKELEQLLSKKNIYLAKQEEYSKKIRELGPLSSDAFEIYKRKNIKELYKLLH
KCNEQLQQFSHVNKKALDQYVNFTEQREELQRRQAELNAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSELVQGGHGFLVMMKKKDSDDIDNDQDDDDPRPADAEGRIEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMVRRMADMAGTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALDFVEHDQS
HDVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttgtaatagaagggtttaagagttaccgggagcaagttgccact
gaaacattcagtcccaaagtcaactgtgttgttggtgctaacggatctggcaaatctaac
tttttccatgcaatacgctttgtgataagcgatttatttcataacctacgcagcgaagaa
aggcaagcgttgcttcatgaaggtgcaggccaccaattattatctgcgtttgtggagatc
gtgttcgataacactgacaaccgtattccagttgacaaggaggaagtacgtctgaggaga
actattggtgttaaaaaagatgaatatttcttggatggaaaacatataacgaagacagaa
gtcatgaatctgctggaaagtgctggattctctcgttctaatccgtattatgttgtgcag
cagggaaagatagcatctctaacattgatgaaggattcagagagactggatctgctgaaa
gaaattggtggaactcgagtttacgaggagagaagacgtgaaagtctgaaaatcatgcag
gagacaggtaataagaaaaagcaaattattcaggttgtccaatacttggatgacagactc
cgggaacttgatgaagaaaaagaggaattaaaaaaataccagcaacttgataagcagcga
aaatctctagaatacactatttatgacaaggaacttcatgatgccaagcagaaattggtg
gagatagaagaggcacgaaacattgtttctgaaacatctgccaagatgtttaatagtgtt
tcaaatgcccatgaaaggtcaaaagtgttggacaagtcgctgaaggatctgactaaagaa
actcaaattctaagcagagaaaaagaagcaatagagaaacaaaggacagaagctattaaa
aagcgagcaaaacttgagcttgatgacagagacctgcatgagaagatccaggggaatatt
aaagccaaggaggatgctgtgaaacagcttgtacttttggataaagaaattcaaggatct
tatgccgagctcaaaacaatcaacgagcagtatgagaaccaagttgggcaggaggagaag
ttgactcgaggtattatggaacgtgaaaagaagcttagcattctgtatcagaaacagggt
cgtgctacccagtttgcaagtaaaaccgctcgtgaccagtggcttcaaaaagaaattaag
gactatgaacaagttttatcttctaaccgtatacaggagagaaaacttagggatgaaatt
gatcttcttgaaaaagatatcagagagcaagacgcctacattaagggcagaaaaagtgaa
gctgctgagtttgagtctctcatttctggatatagacaaggctacaaccattacaaagtt
gagagagacaagttgcatgacgagcgaaagtcattgtggggaagagagagtgagctttct
gctgaaattgaacagctcaagtcagaggttgtgaaagcagagaaaagccttgatcacgcg
actcctggtgatataagaagaggactgaattctgtgagaagaatatgtcgagagaatgaa
attggtggtgtgtttggccctgtttttgagttgctggattgtgatgaaaagttttttaca
gcagttgaagttactgctggaaacagcttatttcacgtggtggttgaaaatgatgaaata
tcaaccaagataattaggcaccttaacgcacagaaaggcggtcgggtcacattcatcccg
ttaaacagagtgcaagctccacatgttacttatccacagagttctgatgtggtaccgctt
ttgaagaagttaaggttctcccaggattataactctgcgtttgctcaggtgtttgcaaag
actgtaatttgccgtgatttagatgttgctacaagggttgcccgtacagatggcctggac
tgcatcactttagaaggtgatcaagtaaacaaaaaaggtggcatgactgggggattttat
gactacaggcgttcaaaactgaaattcatgaagaccattagagaaaatacaaagtcgatt
aacatgaaggaagttgaactggagaaagttaaatgcaaacttcaagagattgaccagaaa
atcaatgaactggtgggagaacagcagagaaatgatgccaagctggctcatgagaaatct
gtacttgaacagattaggcaggatgcgatgaatgctgagaggcaaaagcagtccatttct
aagtctcttgaaaagaaagaaaagttactcaccagtatatcagctcaaatagagcagaat
agagctaatatttcaatgaaagaagatgaaatggggacggaacttgttgatcacttgaca
cctgaagataaagacttgctctctcggttgaatcctgaaataactaagcttaaggagcag
ctaatcacttgcaggagttctcggatggagactgaaacaagaaaagatgagcttgagatg
aatctatctacgaatctagttaggaggaaagaagagttggaggctgtcaaatcatctgga
gagatcgatatgttacaagaagaagctgagttgaaaagtcaggacttggcctatgcaaag
tcattagttgatcaactgactcaacagctgaagagagcgtctgatagcatcgatgatagg
gataggaaattgaaagagattaaagttgagaaagaaaatctaaagaatttggaagatagg
taccaatccactctgcaggacgaagcaaaagaactggagcaactacttagtaagaaaaat
atatatttggccaaacaagaggagtactcaaagaagattcgggaactgggtcctctatct
tccgatgcttttgaaatttacaaacggaaaaacattaaagagctgtataagctgcttcac
aagtgtaatgagcaactgcagcagttcagccatgtaaacaaaaaagcacttgatcaatat
gtaaattttactgagcaacgagaagagctccaaagaagacaagctgagttgaatgcaggt
gacgagaaaatcaaagaacttatatcagttttggatatgagaaaagatgaatcaattgag
cgtacatttaaaggtgttgctaagcatttccgtgaagtattctcggaactcgtgcaagga
ggtcatggatttttggttatgatgaagaaaaaggacagcgatgacatcgataacgatcaa
gatgatgatgatcctcgtcctgcagatgcagaggggaggatcgagaaatacattggtgtc
aaagtgaaggtttctttcaccgggcaaggggaaactcagtccatgaaacaattgtccgga
ggtcagaagactgttgtggcattggctttaatttttgccattcaacgatgtgatccagct
ccattttatctttttgatgagatagatgctgcacttgatcctcagtacagaactgctgtt
ggaaatatggtacgtcgaatggcagacatggctggcactcagttcataaccacgaccttt
cgtccagagcttgtgaaagtcgctgacaagatttacggtgtgacacacaaaaacagagtc
agccgtgttaatgttgtctccaaggaagacgccttagatttcgttgagcatgatcaatca
cacgatgttgattga
DBGET
integrated database retrieval system
