Primulina huaijiensis: 140958454
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Entry
140958454 CDS
T11038
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
phua Primulina huaijiensis
Pathway
phua03013
Nucleocytoplasmic transport
phua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140958454
03015 mRNA surveillance pathway
140958454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140958454
03041 Spliceosome [BR:
phua03041
]
140958454
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140958454
Spliceosome [BR:
phua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
140958454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
140958454
NCBI-ProteinID:
XP_073271995
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All DBs
Position
15:7139967..7146620
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AA seq
912 aa
AA seq
DB search
MSGGFFRGTSTDQDTRFSNKKAKLLKSKKFASELETLVDMTKVKMDVMRPWIAKRVTELI
GFEDEVLINFIYGLLEGKEVNGKEIQISLTGFMERNTGKFMKELWLLLLSAQQNLSGIPQ
QFLDAKEEETKKKKADTDRIAHEILRKKEKEKQELERETAKMDGDGDGDGDTLRDKAAEL
ELNSKPDSMVPSFQPADENKQRERKSMRGRTSPTRNCFLNRDSKSPDLGYHSSSPSDRWS
SRSVSRSPLRRSRSMSSERRYPTSPRQSPNPRKRHVVQPSPSPPRRRSSYSKRRSISPPR
RRSPSPSRYRARLPRRNRSRSPLSHRSRSPFNRRSRSPRRRSRTPIRTSTAHHKFPSPFR
RRSPSPLRRRSPSPVRRKSPSPARRRSPSPLSDKSPSHGQRRSPSTLQRRPRSPFQRKPP
YVGRESRSPVRRRYQRSPSTPRQQSISPARRMSSMIGRKKSSSPVLRRSPRESSSPSSVQ
HNSISPVWRESSKSMRSPQQSHGERVRSLEKNSPAHFTSPSERAELSAKNHRGSKPVDVR
PIISLRSPQRDMLDQNDLHGKEPVLSLSKKKTPLVSDASRERAHFEEQRSSIPRDSLHQR
MERVIRPESPIPMVKAAGPKHQSDHYGASVEDKNFSAREIREQKYGRGTISLTSDQRKDL
IDSTKVHVLDDVSKSTKSQLTSSEGMPDRMNRRERYEKQESSEIRKTTSVSEKKSESYVD
EGDRAGDVNSGPLSDSKRGYRFQESTVLPNLSRKSELNDLNGSTDSPSKEFDEHKTKVKE
KKKRSKSDRHDVESDDCSSDDSYEERKEVKRRRKEEKKLKREERRRRRDERHRRKEERRA
EKWKLKSVDTGDPLSDLEGDYSEDDNDRKRVSQTRTRGNKDTKSEQKNLEIELREKALES
LRAKKGIGNSKD
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggattttttcggggcacgtccaccgatcaggacactcgtttctcgaacaag
aaagcaaagcttcttaaatctaaaaaattcgcctctgaattggaaaccctggtggacatg
acaaaagtgaagatggatgttatgaggccatggatagcaaagcgtgtcactgagctaatt
gggtttgaggatgaagtacttatcaactttatctatggacttctagagggaaaggaagtt
aatggaaaagaaattcaaatttcacttactggatttatggagagaaacactggaaagttc
atgaaagaattatggttgttgcttctaagtgcgcagcaaaatttgagtggcattccacag
cagtttcttgatgcgaaggaggaggaaactaagaagaagaaggctgatacagatcgtatt
gctcatgaaattctaaggaagaaagagaaggagaagcaagaattggaacgcgagactgcg
aagatggatggtgatggtgatggtgatggtgatacattgagagataaggctgctgagttg
gaactcaattcaaaacctgattccatggtgcctagctttcagccagcagatgagaacaag
cagagggaaagaaaaagcatgagagggcgcactagcccgacaaggaattgtttcctcaac
agggattcaaaatctccagatttgggttatcattcctcctctccaagtgacaggtggagt
tcaagaagtgtttctagatcacctctacggagaagtcggtccatgtcatctgaaagacgg
tatcccacttctccaagacagtccccgaatcctcgcaagaggcatgttgttcagccctct
ccttctccaccaaggcgtagatcgtcctattctaaacgaagatcaatttctcctccacga
cgtagatctccctcccctagtagatatagagcgcgtttacccaggcgaaacagatcacgg
tctccattgagccatagatcacgatctccctttaatcgaagatcacgatccccaaggcgt
cggtcgaggacaccaatacggacctcaacagcacatcataaattcccctctccttttcgg
cgtagatcaccctctcctttacggcgtagatctccatctcctgttcgacgcaaatcacca
tctcctgcacgacggaggtcaccgtctcctttgagtgacaaatcaccatcacatgggcag
cgtaggtccccatctaccttgcaacgcaggccacgatctccatttcagcggaagcctcca
tatgttggtcgggagtcacgatctcctgtaagaaggcgataccaacgatctccttcaact
ccgcggcagcaatctatatcaccagctcggcgtatgtcctcgatgatcggtcgaaaaaaa
tcttcatccccagtccttcgaagatctcctcgagaatctagctctccctcttccgttcaa
cacaattccatttctcctgtctggagagaatcttcaaaaagcatgagatcacctcaacaa
tctcatggagaaagggtcagaagcttagagaaaaattctcctgctcattttacttctcca
agtgaaagagctgagctctctgccaagaatcatagaggatcaaaacctgttgacgtcaga
cccattatttctttgagatcaccccagagggatatgctggatcaaaacgacctccatggg
aaagagccagtactgtcactttccaagaaaaagactcctcttgtatcagatgcttctagg
gaaagagctcactttgaagagcaaaggtcgtctattcctcgtgacagtcttcatcagcgg
atggaaagagtcattcgtcctgagagcccaatccctatggtgaaggctgctgggcctaaa
catcaaagtgatcattatggggcaagtgttgaggataagaacttctctgccagggagatt
agagagcaaaaatatggacgtggaacgatttctctgacatctgatcaacgtaaagattta
attgactctaccaaagttcatgttcttgatgatgtctcaaagtcaacaaagagccaattg
acaagcagtgaaggaatgcctgacaggatgaatcgcagagaacgctatgagaaacaagag
tcatcagaaattcgtaaaacaacttccgtgagtgagaaaaaaagcgagtcatatgttgat
gagggtgacagagctggcgacgtgaatagtggtccgttaagtgatagcaagagaggttat
aggtttcaagaatcgacagttttgcccaatttgtcaaggaagtctgagctgaacgatctg
aatggttctacagattctccctccaaggaatttgatgagcacaaaactaaagtcaaagaa
aagaagaaacgcagcaagtcagataggcatgatgtggagtcggatgattgttccagtgat
gattcttatgaggagagaaaggaggtcaaaaggaggagaaaagaggaaaaaaagctgaaa
agagaggagaggcgtcggagaagagacgagcggcatcgtagaaaggaagaaaggcgtgca
gagaagtggaaattgaagtcagtggacaccggtgacccattatctgatcttgagggagat
tattcagaagatgacaatgatcgtaaacgggtgtcgcaaacaagaacaagaggaaataag
gatactaaatccgagcagaaaaacctcgagatagagttacgtgagaaggctcttgagtca
cttcgagccaaaaaagggattggcaattcaaaggattga
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