KEGG   Primulina huaijiensis: 140958649
Entry
140958649         CDS       T11038                                 
Name
(RefSeq) cleavage stimulation factor subunit 50
  KO
K14406  cleavage stimulation factor subunit 1
Organism
phua  Primulina huaijiensis
Pathway
phua03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    140958649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140958649
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     140958649
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_Aladin NBCH_WD40 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_SCAP Cytochrom_D1 Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_NOL10_N Ge1_WD40 Beta-prop_VPS8 Beta-prop_IFT122_1st TPM_phosphatase KNTC1_N
Other DBs
NCBI-GeneID: 140958649
NCBI-ProteinID: XP_073272270
LinkDB
Position
15:complement(18535215..18541297)
AA seq 441 aa
MDSSGLNASGLEKTLQDGKLYRHVNALIVAHLRDNNFNQAASAVASATMTPLNVEAPLNK
LQELVAKGLAVEKDEMLSGGVSSTTLFDSSVPAGYGSIPAPRVVGVDFSAVHDTKGASKT
FPKHETRHISEHKNVARCARFSPDGRFLATGSADTSIKLFEISKVKQMMLPDTRDVPVRP
VTWTFYDHLQPINDLDFHPQNPILISGAKDRTIKFFDFSRPVARKAFRIIQDTHNVRSVS
FHPSGDFLLAGTDHPIPHLYDVNTFQCYLPATVQEIGASGAINQIRYSSTGGIYVTASKD
GAIRIWDGVTGHCIRSILNAHGTAETTSANFTKDQRYLLSSGKDSVVNLWEVGTGRLVKQ
YFGSTHTQLRCQAVFNVTEEFVLSIDEASNEIVIWDALTTERVARWPSNHIGMPRWLEHS
PVESSFVTCGTDRSLRFWKET
NT seq 1326 nt   +upstreamnt  +downstreamnt
atggatagcagcggcctcaacgccagtggattggagaagacattgcaggacggcaaactt
taccgccatgtcaatgcgctcattgttgcccatctccgtgacaacaatttcaatcaggca
gcaagtgcagttgcatcagctacaatgacaccactaaatgttgaagcacctcttaacaaa
ctccaggagttggttgccaagggtcttgcagtggagaaagatgagatgctgagtgggggg
gtatcttcaactactttgtttgattcaagcgtacctgctggatatggctcaatacctgct
cctcgagttgttggtgtagatttcagtgctgtgcatgatacaaaaggagcatcaaagacc
tttccaaagcatgaaacacggcatatttcagaacacaagaatgttgctagatgtgcaagg
ttcagccctgatggaagatttcttgcaactggaagtgcagacacgtcaattaagctcttc
gagatatcaaaagtgaagcaaatgatgcttccggatacaagagatgttcccgtgcgacct
gtaacttggacattttatgatcacttacaacctatcaatgatttggatttccatcctcaa
aaccctattttgatttctggtgccaaggatcgcacaataaagttctttgatttttcaaga
ccggttgcaaggaaggcattcagaattattcaggatactcacaatgtgaggtctgtatct
tttcatccatctggagattttcttttggcaggaactgaccatccaatcccacacttgtac
gatgttaacacctttcagtgctaccttccagcaactgttcaagagattggtgccagtgga
gccataaatcagatcaggtattcatcaacaggtggcatttatgttacagcatcaaaagat
ggtgccattcgtatttgggatggggtaactggtcattgtatccgttcgattctgaatgca
catggaacagcagaaaccaccagtgcaaatttcacgaaagatcaaaggtatcttctctca
tctggaaaggattccgtcgtaaatctctgggaagttggcacgggtagattagtcaaacaa
tattttggatccactcatacacagttgcggtgccaagctgtctttaatgtaacggaagaa
tttgttctctccatcgatgaagcgagtaatgagattgttatatgggatgctcttacgact
gagagagtagctagatggccatcaaaccatattggcatgcctcgttggctcgagcattcc
cccgtagagtcatcatttgtcacatgtggaactgacaggtcattgagattctggaaagaa
acctga

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