Primulina huaijiensis: 140959016
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Entry
140959016 CDS
T11038
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
phua Primulina huaijiensis
Pathway
phua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140959016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140959016
Enzymes [BR:
phua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
140959016
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
HECT type E3
140959016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
HEAT_EZ
PDS5
Motif
Other DBs
NCBI-GeneID:
140959016
NCBI-ProteinID:
XP_073272806
LinkDB
All DBs
Position
15:complement(1537602..1548689)
Genome browser
AA seq
1905 aa
AA seq
DB search
METRSRKRAEASTSAAPSRSTSGPSTRATKRARIIPTSTAATASNATTTASSISTRSRTA
ARLSSMDTAPEPSTASASSTRSRRRKNLSSYQNWENNDNSSSDKGKEKEPEIRLRDRDTD
RERSIGLNVDSHEGVEEDENDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAI
GGSSSSHQNGRLKKILSGLRADGEEGKQVEALTQLCDMLSIGTEESLSSFSVDSFVPVLV
GLLNHESNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCLVARLLTIEYMDLAEQSLQ
ALKKISQEHPTACLRAGALMAVLSYHEFFSTGVQRVALATAANMCKKLPSDAADFVMEAV
PLLTNLLQYHDAKVLEHASICLTRIAEAFASSSEKLDALCNHGLVTQAAALISSSISGGA
QVSLSSTTYTGLIRLLSICANGSPLGSKSLLLLGISGILKDILSGSGLVSSMSVSPALSR
PPEQIFEVVNLANELLPPLPRGTISLPLNSNLFVKGSFPKSDHSGTSGKQEDSNGNIQEV
STREKLLNEQPELLQQFGMDLLPVVIQIYGSSVNAPVRHQCLSVIGKLMFFSTAEMIQSL
INVTNISSFLAGVLAWKDPHVLVPALQIAEILMEKLPTVFSKMFVREGVVHAVDMLILSG
STGTSQLSTNEKDNDSITGSSTRSRRNRRRGGNGTDVNVVDDSINSTPNLISPSNSVEIS
TVNSPLQATVSAYAKTFKEKYFPSDPNSHEIGFTDDLLRLKNLCVKLNVGIDDQKTKLKG
KSKAHGARLSDSSISKEENLVNVITEMLQELSRGDGVSTFEFIGSGVVASLLNYFTCGYF
SKERISEANLPKLRQQAIRRYKSFVSVALPRSVDERNVVPMSVLVQKLQNALSSVERFPV
VLSHTSRSSGGNSRLSSGLSALSQPFKLRLCRAPGEKSLRDYSSNVVLIDPLASLATVED
FLWPRIQRSESGLKSSASDGNAESGTTSAAAGVSSPSTFTPASAVRRHSTRSRSSLNIGD
TAKKESPQEKSSISLKAKGKAVLKPGPEEGRGPQTRNATRRRAALDKDNQMKPLDADTSS
ELSASQDDELDMSPFEIDETSVIEDDDVSDDDDDDNDDVLRDDNLPICMPDKVHDVKLGD
SSEDIPAPASNDVQNNPTCSSSSQGTSVKGSDSVEFRRGSSLGSRGAMSFAAAAMAGFAS
GNYRGVRGVRDRHGRPLSGIDDPPRLTFTAGGKQLNRNLTIYQAIQRQLVSSGDDEDMFT
GTDLLSSDGSRLWTDIYTIMYQKPSNQAEKPSVGAVTLTVQSSSAKASTSSNSGSDASSH
RFSLLDSILQGELPCDLERSNPTYNILALLRVLEGLNQLAPQLRVQAVIDSFSDGKVPNL
DVLSFAGVKAPPEEYINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRR
QYFYSTAFGLSRALYRLQQQQGVDGHGSSNEREVRVGRLQRQKVRVSRNRILDSAAKVME
MYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHELQKVGLGMWRSSLMLGRPSMEIDVGG
QSDMKPHELSMHTAGDGGDSVHVPLGLFPRPWPPNVDTSEGSQFSKVVDYFRLLGRVMAK
ALQDGRLLDLPLSTAFYKLLLGQELDLHDIISFDTELGTTLQELQALVCRKQYLESIGSS
NQQELCFRGASIEDLCLDFSLPGYPDYALKPGDENVEMNSLGEYISLVVDAMVGTGIMRQ
MEAFRSGFNQVFDISTLQIFSANEVDYLLCGRRELWKADALADHIKFDHGYTAKSPAVVN
LLEIMGQFNPEQQRAFCQFVTGAPRLPPGGLAALNPKLTIVRKHSSSMGNMAHNGPGPSE
TADDDLPSVMTCANYLKLPPYSTKEIMYQKIVYAITEGQGSFDLS
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccgcaagcgggcggaggcatctacctcagcagcgccttctcgttct
acatctggaccctctacacgcgccaccaaacgtgctcgtatcatccccacctccaccgcc
gcaactgctagcaacgcaaccaccactgcttcatcgatttcgactcgttcccgaactgca
gctcgtctatcttctatggacaccgccccagaaccttccacggcctctgcctccagtacc
cgcagccgccgacgcaaaaaccttagcagttatcaaaattgggagaacaatgacaatagc
agctctgataaaggtaaagagaaagagcctgaaatcaggctcagggatagagatacggac
agagaaaggagcatagggctaaacgttgactcccacgagggagtggaggaagatgaaaat
gacagtgagggtggagttgggattttgcaccagaatttgacttctgcgagtagcgccctt
caagggttgttgagaaagctgggtgctggattggatgatttgctcccgagttctgctatt
ggtggaagttcgtcttcccatcaaaatgggcggctgaagaagattttgtctgggttgagg
gccgatggcgaggagggaaagcaagtggaggcattaacgcagctctgtgatatgctttcc
attgggactgaggaatctttgagttctttctcagttgattcttttgttcctgtgctcgtg
ggattgcttaatcacgagagtaatcctgatatcatgcttctggcagcgcgggcattgaca
catttggtcgatgtgctaccgtcctcttgtgctgcagtggtccattatggcgccgtttct
tgccttgttgctaggctgcttactattgagtacatggacttggctgaacagtcgctgcaa
gctttgaagaagatatcacaggagcacccaactgcctgcttgcgtgctggtgcacttatg
gccgtgctttcgtatcatgaatttttctccactggtgttcagagggtcgcattagctact
gccgcaaacatgtgcaagaaactgccttcagatgcagctgattttgtcatggaagctgtt
ccattattgactaatcttctacagtatcatgatgcaaaggttttagaacacgcatctata
tgcttgacgcggattgctgaagcatttgcttcatcatcagaaaaactcgatgcactttgc
aatcatggactagtcacacaagctgcagccctcatttcatccagcatttctggtggtgcc
caggtttccctcagcagtactacatacacaggattgattcggcttctttcaatatgtgca
aatggttctcctttaggttcaaaatccctacttctccttggaattagtggaattcttaaa
gatattctgtcggggtctggtcttgtttcaagcatgtctgtttcacctgccttaagtaga
ccaccagagcagatatttgaggtcgtgaacctcgcaaatgagcttcttccgccacttcct
cgtgggactatatctcttccactcaacagtaatctttttgtcaaaggttcttttcctaag
agcgatcattcaggcacttctggaaaacaagaagattcaaatgggaatatacaagaggtt
tcgacacgtgagaaactattgaacgagcaacccgaacttttgcaacaatttggaatggat
cttcttcctgttgttatccagatatatggttccagtgtgaatgctcctgttcgccatcag
tgtctctcagtcattggaaaactgatgttcttcagcacagcagaaatgatccaatctttg
ataaatgttacaaacatatcaagtttcttagcaggggtcttagcttggaaagatcctcat
gttttagtccccgctcttcagatagcagagattttaatggaaaagcttcctactgttttc
tctaagatgtttgtaagggaaggcgttgttcatgctgtggacatgttgatactgtcggga
tctactggcacttcacagctgtccaccaatgagaaggataatgattctattactggatca
tcaacccgttctaggcgaaatcgacgacgaggtggtaatggcacagatgtaaatgttgtg
gatgattctataaactcgactccaaatttaatttcaccatcaaattcggttgaaatctca
actgtcaattcacctcttcaggctactgttagtgcatatgcaaaaactttcaaagaaaaa
tattttccttcagatccaaattcccatgaaattggatttacggacgatcttctccgcctc
aagaatctttgcgtgaagttgaatgtggggattgatgatcagaagactaaactgaaggga
aaatcgaaagctcatggtgctcgactttctgacagttctatcagtaaagaggaaaacctg
gttaatgttataactgagatgctgcaggagctgagcagaggagatggtgtatcaactttt
gagttcattggtagtggagttgttgcatctttgctcaactactttacttgtgggtatttc
tccaaggagagaatttctgaagctaatctgcctaagctccggcaacaagctatcagaaga
tataagtcttttgtttccgttgcgcttcctcgtagtgttgatgaaaggaatgtagtcccg
atgagtgttttggttcaaaaacttcaaaatgctctttcatcagtggagcgattccccgtt
gttctcagccacacttctcgatcatctgggggaaattctcgcctttcttctgggttaagt
gcattgtctcaaccattcaagttgcgtctttgcagagccccgggggagaaatctctccgt
gattactcttcaaatgttgtactgattgatccattagcaagtttggctactgtagaagac
ttcctgtggcccagaattcaacgaagtgaatctggtttgaagtcttcagcgtctgatggg
aatgcagaatctgggaccacttccgcagctgctggtgtttcttcaccatctacatttact
ccggcttctgctgttcgacgacattcgacacgatccaggtcatctcttaatataggtgat
actgcaaaaaaggagtccccccaagaaaaaagttccatctcattaaaagcaaagggcaag
gcagtcttgaaaccaggcccagaagaggggaggggaccccaaaccaggaatgcaactcgt
agaagagctgctctggacaaagataatcaaatgaagccattggatgcggacacaagttct
gagttgtctgcatcgcaggatgatgaattggatatgtcacccttcgaaattgacgaaact
tcggtgattgaagatgatgatgtatcagatgatgacgatgatgacaatgatgatgtattg
agagatgataatcttcccatttgcatgccagacaaagtgcatgatgttaaattgggtgat
tcttcggaagacattcctgcccctgcatcaaatgatgttcagaacaatccaacatgtagt
tctagcagccaaggcacatcagtgaaaggatctgattctgttgagttcaggcgtgggagt
tcattaggttcaagaggtgcaatgtcctttgctgctgcagctatggctggctttgcatct
ggaaattatagaggtgtaaggggtgttagagatcggcatggtcgtccactctctggaatt
gatgatcctcctagacttacatttacagcgggagggaagcagcttaatagaaacttgact
atttatcaggcaattcaacgccagcttgtttcgagtggggatgatgaggatatgtttact
ggaacagatcttttatctagtgatggaagccgactttggactgatatttacactataatg
tatcaaaagccaagtaatcaagctgagaaaccttcagttggtgctgtgaccttgaccgtt
caatccagttctgcaaaagctagcacatcaagtaactctggatctgatgcatcctcacat
cgtttctcactgctagatagcatcctgcaaggggaacttccttgtgacctggaaagaagt
aatcccacctataatatattagcactattacgtgtactagagggattgaaccagcttgca
cctcaattgcgagttcaagctgtgatagacagtttctctgatgggaaagttccaaatctg
gatgtacttagtttcgctggggtcaaagctcctccagaggaatatataaatagcaagctt
actccaaaactggctcgacagattcaggatgcacttgctctttgcagtgggtctcttcct
tcatggtgctatcagctgacaaaagcttgcccatttttgtttcctttcgagactcgacgc
cagtacttctattcaacagcatttggactgtcccgtgcactatatcgcctacagcagcag
caaggtgttgatggtcatggatcctcaaatgaaagggaggtgagagttgggagattacag
cgccagaaagttcgtgtttcccggaatcggatattagattctgcagcaaaagttatggag
atgtattctagtcaaaaagctgtgctcgaggttgaatattttggtgaggttggcactgga
ttggggcccacactagagttttacactcttttgagccacgaacttcagaaagttggatta
ggaatgtggaggtcaagtttgatgttgggtagaccctcgatggaaattgatgtaggtggt
caatcggatatgaaacctcatgagctgtctatgcatacggctggtgacggtggagattct
gtgcatgtgcctcttgggttgtttccacgaccttggccccccaatgttgatacttccgag
ggtagccagttttctaaagtcgtcgattattttcgtttacttggaagagttatggccaaa
gctcttcaagatgggaggcttttggatctgccgctttctactgctttttataagctttta
cttggtcaagagctggatttacatgatataatttcttttgacactgagcttgggacgact
ttacaagaattgcaagcccttgtatgccggaaacaatatttggaatccattggaagctct
aatcaacaagagttatgcttccgtggagcttctatagaagacctctgtttagacttctcc
cttccaggctatccggattatgcactaaaaccaggcgatgaaaatgtggaaatgaatagt
ttgggggaatatatttcccttgtggtagatgctatggtagggactggaatcatgcgtcaa
atggaagcatttagatctggctttaatcaggtgtttgacatctcaactcttcaaatcttt
tctgcaaatgaggtggactatctgctctgtggccgtagagagctgtggaaggcggatgca
cttgcagatcacatcaaatttgatcatgggtatacagctaagagtcctgcagttgtaaat
cttcttgagatcatggggcaatttaacccagaacagcaacgggccttctgtcagtttgta
actggtgctcctcgtctccctccaggtggtttggctgccctcaatccaaaattgactata
gtcagaaagcattcttcaagcatgggcaacatggcacacaatggtcctggtccatcagaa
actgctgatgatgacctaccaagcgtgatgacatgtgcgaactatttaaagcttcctcca
tactctaccaaggaaattatgtaccagaaaattgtctatgctatcaccgaaggacaagga
tcttttgatctgtcatga
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