Primulina huaijiensis: 140959130
Help
Entry
140959130 CDS
T11038
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140959130
03036 Chromosome and associated proteins [BR:
phua03036
]
140959130
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140959130
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
140959130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
Tex_central_region
HHH_9
HHH_3
Tex_N
S1
Motif
Other DBs
NCBI-GeneID:
140959130
NCBI-ProteinID:
XP_073273007
LinkDB
All DBs
Position
15:complement(25315535..25327242)
Genome browser
AA seq
1588 aa
AA seq
DB search
MAGNTFISDDEDEIGVEEEEVDEGPFGDRARDGEYDEDDEDDEGQDEYEKDGFIVDDVEE
EEGEEEERADSDKERQKKKKRKKRDSERNYVLDEDDYELLQESNISVPRPKLENKKFKRL
KKARRDVEEGSSGFSDEEEFDGNGMGGRTAEEKLKRSLFGDDNGQPLEDIAEEDEQAEEE
EDVDMGEEDEMADFIVDEEEVDEHGAPVRGKKPKKSKQRPGISSYALQEAHEIFGDVEDL
LRIRKLEVRDTYGETGERSLEDQFDPSVLSDKYMTEKDDRIREIDIPERTQISEESTGQP
AIDELSVELEREWIFNQLVGGVVPFMNKRGSAAEDLNEVKSHIARFLELMHGQKLDIPFI
AMYRKEEIFSLLQEPDEPEADIQNDPNWRATLKWHKVLWTIHDLDKKWLLLQKRKSALQL
YYKKRFEEELRRVYDETRLTLNQQLFESVSKSLKAADSERELDDVDSKFNLHFPPGEVVL
DEGQFKRPKRRSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKMRMDELEDAKETPEEM
ASNFTCAMFETSQAVLKGARHMAAVEISCEPCVRRHVRSIFMENALVSTSPTSDGNVAID
SFHQFAGVKWLRDKPLTRFEDATWLLVQKAEEEKLLQVTIKLPEVVLDKLISDSNDYYLS
DGVSRSAQLWNEQRKLILHDAFYNFLLPSMEKEARSFLTTRAKTWLLWQFGKLLWDKVSV
APFQQKENDVNTDEEAAPRVMACCWGPGKPATTFVMLDAAGEILDVLNAPSLSLSNQNVN
AQQHKRNDQQRVQKFMMDHQPHVVALGAANLSCTRLKEDIYEIIFKMVEDNPRDVGHDMD
NLNIFYGDESLPHLYENSRISVDQLPSQEGIIRRSVALGRCLQNPLAMVATLCGPGREIL
SWKLHPLENFLTPDEKYGKVEQVMVDITNQVGLDINLASSHEWLFAPLQFISGLGPRKAA
SLQRSLVRAGAIFTRKDLLTHHGLGKKVFINAVGFLRVRRSGLTSSSTQFIDLLDDTRIH
PEFYGLAQELAKDIYREDVNDDVNDDDDMLEMAIEHVREKPQLLRAVDVHEYADQKNRLN
RKETLNDIRLELIEGFQDRRRPYVEPSQDDEFYMISGETEETLSEGRIVQATVRRIQPQR
AICVLESGLTGMLTKEDCADDWRDINELSDKLHEGDIITCKIKSIQKNRYQVFLTCRENE
MRNNRLQNHRSMDPYYHEERSATHTEQEKAHKEKELAKKHLKPRIIVHPRFQNITSDEAV
EFLSDKDPGESVICPNAHGPTHLTLTLKIYDGVYANKDIVEGGKEHKDITSLLRIGKTLK
IGEDTFEDLDEVMDRYVDQLVAHLKAMLNYRKFRRGTKYEVDELLKIEKSENPMRIVYCF
GISHEHPGTFILTYIKGSNPHHDYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLDSS
PSIRSVAAMVPMRSPATGGSSGFGGGCSGSAQVDEWRVGQCMDRDRTSRTGRGEYRNGGG
QEGHPSRAPRLYGNRGRLRERGSCGQGRQVGVTKVVMAERFRSALIVEASSVADGVVSNA
SASSIPPSGSSEKSVAVDKTPFGIQASV
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaacacattcatctccgacgatgaagatgagattggagttgaggaagaagaa
gttgatgaagggccttttggagaccgagcccgtgacggtgaatacgatgaggatgacgaa
gacgatgaaggacaggatgaatatgagaaagatgggttcatagtggatgatgttgaggaa
gaagagggggaggaagaagaaagagctgatagtgacaaggagaggcaaaagaagaagaaa
aggaagaaaagggactctgagaggaactacgtgcttgatgaagatgattatgaacttctt
caggagagcaacatctccgttcctcgcccaaaacttgagaacaagaagttcaaacgattg
aaaaaggctcggagagatgtggaagaaggttcgtctgggttttctgatgaagaggagttt
gatggaaatggaatgggagggcgtacagctgaggagaagctcaaacgtagcttgtttggt
gatgataatggacaaccccttgaggatattgccgaggaggatgagcaggcagaagaagag
gaggatgtagacatgggtgaagaagatgaaatggctgattttattgttgatgaagaagaa
gttgatgaacacggagctcctgtgagggggaagaagcccaaaaagagcaagcaacgacct
ggtatatcatcatatgcactccaggaagcacatgaaatatttggagatgttgaagacctt
ctgaggatacgcaaattggaagtgagagacacatatggtgaaaccggtgaaagaagcctt
gaagatcaattcgatcccagtgtactttctgacaagtatatgactgaaaaggatgatcga
atcagggaaatagacattcctgaaagaacgcagatatctgaggaaagtactggtcaacct
gcaatagacgaacttagcgttgagttggagagagagtggatatttaatcagcttgtgggt
ggtgtagtgcctttcatgaacaagagaggttctgcagctgaagatttaaatgaagtcaag
agccatattgcaagatttttggaattaatgcatggtcagaagttagatataccattcatt
gctatgtaccggaaagaggagattttcagcctattacaagaaccagatgagcctgaagct
gacattcaaaatgaccctaactggagagcgacactaaaatggcacaaggtgctttggaca
atccatgacttggataagaagtggcttcttcttcagaaaagaaagagtgcactacagtta
tactacaagaagcgatttgaggaagagttacgaagagtatatgatgagacacggcttact
ttaaaccaacaactctttgaatcagtttccaagtcactcaaagctgctgattcagaaaga
gaattggatgacgtcgactctaaatttaatttgcacttcccccctggcgaagttgtcctt
gatgaagggcagtttaaaagaccaaagaggaggtcgcagtacagcatttgcagtaaagct
ggcttatgggaggttgcaaataagtttggttacagttctgagcagtttggattgcagatt
tctctggagaaaatgagaatggatgaattggaagatgcaaaggaaacacccgaagaaatg
gcctctaattttacgtgtgctatgtttgaaacgtctcaagctgttctcaaaggtgcaagg
cacatggcagctgtggagattagctgtgaaccatgtgtccggaggcatgtccgtagcatc
tttatggaaaatgctctagtgtcaaccagtcctacatccgatgggaacgtggctattgat
tcttttcaccagtttgctggagtgaagtggttacgagacaagccacttactagattcgag
gatgcaacttggcttttagttcagaaggctgaagaggagaagctccttcaagtaaccatc
aagctaccagaagtagttctcgataaattgataagcgactcaaacgattattatctaagt
gatggagttagcagatccgctcaattatggaatgagcagagaaaattaattcttcatgac
gcgttttacaattttcttctaccttcaatggaaaaagaagctagatcatttctgactacg
agagcaaaaacctggttgctatggcaatttggaaagctgttgtgggacaaagtatccgtg
gcaccatttcagcaaaaagaaaatgatgtcaatacagatgaagaagcagcacccagggtt
atggcttgctgctggggccctggtaagccagctacgacttttgtgatgctggatgcagct
ggagagattttagatgtgctgaatgctccatcactcagccttagcaatcagaatgttaat
gctcagcaacataagagaaatgatcaacagcgtgtgcagaaatttatgatggaccaccag
ccacatgttgtcgctctaggggcagctaatttgtcttgtactcggctgaaggaagatatt
tatgagattatattcaaaatggtggaggataatccaagagatgttggtcacgatatggat
aatctgaatattttctatggtgatgaatctcttccgcacttgtatgaaaattcccgcata
tctgtggatcagcttccctcccaggaaggtataatcagacgttctgtggctctgggacgc
tgtcttcagaatccattagccatggttgcaacattatgtgggccaggtagggagatatta
tcttggaaactgcatcccttggaaaattttctgacccctgatgagaagtatgggaaggtt
gaacaagttatggtggatataactaaccaagttggtcttgacattaacttggcttccagt
cacgaatggttgtttgctcctctgcagtttatttctgggcttggacccagaaaagcagct
tctctccaaaggtctttagtaagagctggagccattttcactaggaaagacctgttgaca
catcatggtcttggtaaaaaggttttcattaatgcagttggtttccttcgagtccgtcgt
agcggattgacttctagtagtactcaatttattgatttgttagatgatacaagaattcat
ccagagttttatggccttgctcaagaactggccaaagatatttaccgggaggatgtcaat
gatgatgtcaatgatgatgatgatatgctggaaatggccattgaacatgtcagggaaaag
cctcagttattgagggctgttgatgttcatgaatatgctgatcagaaaaaccgtttgaac
agaaaagaaaccctcaatgatataagattggagttaattgaaggattccaagatcgtcgc
agaccatatgtggaaccaagtcaggatgatgaattttacatgatctcaggagaaactgaa
gaaactttatcagaaggaaggatcgtacaagcaacagtgcgaaggattcaacctcaaaga
gctatttgtgtccttgaatctggattgactggcatgctcaccaaggaagattgcgctgat
gactggcgtgatattaatgaattatctgataaactccatgaaggtgatattataacatgc
aaaatcaaatcaattcaaaagaatcgttatcaggtgttcttaacttgtagagaaaatgaa
atgaggaataaccgcttgcagaaccatcgaagtatggatccttactatcacgaagaacgc
agcgccacacacaccgagcaggaaaaagctcataaagaaaaggagcttgcgaagaaacat
ttgaagccaagaataattgtccaccctcgattccaaaatatcacttctgatgaggcagta
gagtttctttcagacaaagatcctggtgaaagtgttatctgtccaaacgctcatggtcct
acacatttgactttaacattgaaaatctatgatggggtttatgcaaacaaggacatagtt
gaaggtggaaaggaacataaggacatcacaagcttgcttcgaatagggaaaacattgaaa
attggagaggacacctttgaggatcttgacgaggtaatggatcgttatgtggatcaattg
gtagctcatttgaaggcaatgcttaattacagaaagtttaggaggggcactaaatatgaa
gtcgatgagctccttaaaattgagaaatctgagaatccaatgagaattgtctattgcttt
ggtatatcccatgaacatcctggcacattcatcctaacttacatcaaaggttcaaatcca
catcacgattacataggtctctatccgaagggatttaaattccggaagcgaatgttcgaa
gacatagaccgtcttgtggcatattttcagagacacattgatgatccgcttgattcttca
ccatcaattcgatctgttgctgctatggttccaatgagaagtcctgcaactggcggctca
tctggttttggtggtggttgcagtggttcagcacaggttgacgagtggagagttggccaa
tgtatggacagagacaggacttctagaacagggagaggtgagtacagaaatggtggtggg
caggagggtcaccccagccgggctcctagactgtacggtaaccgaggacgtttgcgtgag
cgaggctcctgtggtcaggggagacaggtaggagtaacaaaggtggtgatggcagagaga
ttcagaagtgcattgattgttgaggcatcttcagttgctgatggagtagtctccaatgct
tccgcgtcttctattcctccctcaggcagcagtgagaagagtgttgctgttgacaaaact
cccttcgggatccaagcttcagtttga
DBGET
integrated database retrieval system
