Primulina huaijiensis: 140959202
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Entry
140959202 CDS
T11038
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
phua Primulina huaijiensis
Pathway
phua03013
Nucleocytoplasmic transport
phua03015
mRNA surveillance pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140959202
09122 Translation
03013 Nucleocytoplasmic transport
140959202
03015 mRNA surveillance pathway
140959202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140959202
03041 Spliceosome [BR:
phua03041
]
140959202
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
140959202
Spliceosome [BR:
phua03041
]
Common components
Common spliceosomal components
Cap binding complex
140959202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
BNI5_helical
DYH2-5-8_CC
CLIP1
IPT
DUF8221
CCDC39
T4SS_LegC2C7
Motif
Other DBs
NCBI-GeneID:
140959202
NCBI-ProteinID:
XP_073273141
LinkDB
All DBs
Position
15:21413113..21431379
Genome browser
AA seq
862 aa
AA seq
DB search
MSSWRSLVLRIGENCSEYGGNTDYKDHLETCFGVVRRELLHSSDDILPFLLQCAEQLPHK
IPLYATLVGLLNLENEDFVRNIVERIHANLQAALDVGNCNRIRVLMRFLTVLMCSKVLLP
SSLIVLFETLLSSAATTVDDEKGNSSWQACADFYITCILSCLPWGGAELVEQVPEDINRV
MVGIQAYMSIRRHVSDTGCCAFEYDHERNRGDVQKDFLEDLWGRIQDLSNKGWKADSVPR
PHLSFEPQLVSAKSHDFGSLNCPEQPKPPAEVTGITYGIQKHEADLKYPPRMRSLNIFPS
SKTEQDLQPIDRFVAEEYLLDVLLFLNGCRKECASSMAGLPVSFRYEYLMCETIFSQILL
LPQPPFKPIYYTLVIMDLCKALPGAFPSVVAGAVRALFDKIADLDMECRTRLILWFSHHL
SNFQFIWPWEEWSYVLDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSVESAPALEELLPP
KGTPNFRYSLEDGDHTEHSLSAELNGMVKDRLTSREIISWIESRIIPEQGLDVTLRVVVQ
TLLNIGSKSFTHFITVIERYGQVIARICSAQEKQVSLLSEVSSFWKNNAQMTAIAIDRLM
GYRLVSNLAIVRWVFLPENVEQFHVSDRPWEVLRNAINKTSNRITDLRKEISVLKKSVVS
ASEAASKAQSDLEDAKSKLTLTLVGGEPVLAENPVKMKRLQSNVNKTKESEVSFRESLEA
KEALFARAAGEIEELFIFLYKNFLKVLAGPLLDTEGTLHPFPEVDEMTIDKEDSPAAEVD
NADERPQKSHPNGKETRNEYNVGEKEQWCLSTLGYVKAITRQYSSEIWSHIEKLEAEVLI
EDVHPLIRKAVYSGLCRRTDGF
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggcggagtcttgttctccgaatcggagagaattgctcggagtatggtgga
aacaccgactacaaagaccatttggagacttgttttggcgttgttcgccgtgaattgttg
cattccagtgacgatattttaccctttcttctccagtgtgctgagcagttgcctcacaag
atacctttatacgcaacattggttgggcttttgaacttggaaaatgaagattttgtccgg
aatattgtggagaggattcatgctaatttgcaggctgctttagatgttggaaattgtaac
cggatccgtgtacttatgcgctttctgactgtactgatgtgcagtaaagttctcctacca
agttcgttaattgttttattcgagacattattgtcgtcagcagcaactactgtggatgat
gaaaagggaaattcctcgtggcaagcttgtgccgatttttatataacatgcattttatct
tgtctcccttggggtggagcagaactggtggagcaagtccctgaggatataaatagagtt
atggtgggaatacaagcatacatgagtatcagaagacatgtttctgacactgggtgctgc
gcatttgaatatgatcatgaaaggaatcggggtgatgtccaaaaagacttcttggaggat
ctatggggccggattcaagatctttccaacaaggggtggaaggcggatagcgtacccaga
ccccacctttcatttgaaccacagctggtttctgcaaagtctcatgattttggttccttg
aactgtcctgagcaacctaaacccccggctgaagtaacagggatcacttatggcatacag
aagcatgaagctgatttgaaatatcctccacgtatgcgcagcctcaatatttttccttca
agcaagacagagcaggatttgcaacctatagatcggttcgttgcggaagaatatttacta
gacgtgcttctatttttaaatggctgtcgaaaggaatgtgcttcatccatggctggccta
cctgtttccttccgatatgagtaccttatgtgtgagacaatattttcccagattctctta
ttaccccaaccgccattcaagcccatctactataccttggtcatcatggacctctgcaag
gctcttccaggtgcctttccgtctgttgtagcgggggctgttcgtgctctttttgataaa
attgctgatttagacatggagtgccgtacacgccttatcctttggttttctcaccatttg
tctaattttcaatttatttggccatgggaagaatggtcttatgttcttgacctcccaaaa
tgggcgcctcaaagggtgtttgttcaggaggttttggaaagggaagtgcggctgtcatat
tgggacaaaattaaacagagtgttgagagtgctcctgctttagaggaattgctgccacca
aaaggtactccaaatttcagatacagtttagaagatggggatcataccgaacacagcctc
tcagcagagctcaatggaatggtgaaagaccgattaacttctcgtgaaattatctcatgg
attgagagtcgaataattcctgagcaagggctagatgtcacgctcagagtggttgttcag
actcttctcaatattggttcaaaaagctttactcattttattactgtcatagagaggtat
ggccaggtcattgcaaggatttgttctgctcaggagaagcaagtttcactgttatctgaa
gtgagttctttctggaaaaacaatgctcaaatgacagccatagccattgacagattgatg
gggtatcgccttgtatctaatctggctattgtgagatgggtcttcttgccagagaatgtt
gagcaatttcatgtttctgatcgcccctgggaggtcttgagaaatgcaattaacaaaaca
tccaatcgcattactgatctgagaaaagagatatcagtcctaaaaaagagtgtggtctcc
gcttctgaagctgcatcaaaagcgcaatctgacttagaggatgcaaagtcaaagcttact
ctcacccttgtgggtggtgaacctgttcttgcagaaaatcctgtgaaaatgaaacgcttg
caatccaatgttaataaaacaaaggagtccgaggtttctttccgtgaatccttggaagct
aaagaggctctttttgctcgagctgctggtgaaattgaggaactatttattttcttgtac
aaaaactttttgaaagtattggcgggaccccttctggatacagaaggtaccttgcaccct
tttcccgaggtagatgaaatgactattgacaaggaagattctcctgcagcggaggtggat
aatgctgatgaaagaccacaaaaaagtcatcccaacggtaaagagaccagaaatgagtat
aatgttggtgaaaaggaacagtggtgtttatcaaccttgggctacgtcaaggccatcact
cgtcaatattcttccgagatctggtctcatatcgagaaattagaggccgaggtattgatc
gaggacgttcatcccctcatacggaaagcggtatactctggtctgtgtcgacgtaccgat
ggcttttag
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