Primulina huaijiensis: 140960146
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Entry
140960146 CDS
T11038
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
phua Primulina huaijiensis
Pathway
phua03030
DNA replication
phua03410
Base excision repair
phua03420
Nucleotide excision repair
phua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140960146
03410 Base excision repair
140960146
03420 Nucleotide excision repair
140960146
03430 Mismatch repair
140960146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phua03032
]
140960146
03400 DNA repair and recombination proteins [BR:
phua03400
]
140960146
DNA replication proteins [BR:
phua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140960146
DNA repair and recombination proteins [BR:
phua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140960146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
RCF1-5-like_lid
PTCB-BRCT
AAA_30
Rad17
AAA_19
AAA_assoc_2
nSTAND3
BRCT_2
AAA_18
DNAX_ATPase_lid
Sigma54_activ_2
DUF2969
RuvB_N
AAA_5
AAA_24
AAA_16
Gp44_lid
AAA_14
Zeta_toxin
NTPase_1
TsaE
Motif
Other DBs
NCBI-GeneID:
140960146
NCBI-ProteinID:
XP_073274395
LinkDB
All DBs
Position
15:5153549..5163859
Genome browser
AA seq
1011 aa
AA seq
DB search
MSDIRKWFMKQHEKGAGNDNSSKPAKSSTLEKPPGVDPQPEKVAQGEDFLGRRKTSKYFA
KDKQNVEDETGVKEVSTKRKGRGDGGVLSKELKPPPEKKIHKIEIDDEDRDFISSSSRRS
TMGTTPGKRRIGSVTKSSRKFSAESDDDDYAEIKSNSNAAGKGRGAKDSSATPINAKSTD
VAGSEEEDLDDKDVKSVKSGGRSRGGRGVPASAKGRGGGGRGGFMNFGERKDPPHKGEKE
VPEGAASCLDGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRK
SEKAKELGTVFLTEDGLFDMIRASNNSATAMQATKKTPDKVVPSPTKKSLQKPEQLKQVG
HIVASKDAKGLTSSAVYSKLPSTQNLLPWTEKYKPKVPNDIVGNQSLVKQLHDWLANWNQ
QFLNAGQKGKGKKPNDSGAKKCVLLSGTPGIGKTTSAKLVSQMLGFRAIEVNASDSRGKA
DAKIQKGIGGSTSNSIKELISNEGLNPNMERSQNPNTVLIMDEVDGMSAGDRGGIADLIA
SIKISKIPIICICNDRYSQKLKSLVNYCLLLSYRKPTKQQMAKRLSQIVNAEHLQVNEIA
LEELAERVNGDMRMALNQLQYMSLSLAVLNFDDIKQRLQNSSKDEDISPFTAVDKLFGFN
GGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSSGKDDNQLKRMSLLARAAESIADGD
IVNVQIRRYRQWQLSQIGSLASCIIPAALLHGQREILEQGERNFNRFGGWLGKNSTAGKN
YRLLEDLHVHLLSSRESNLGRATLRLDYHTLLLKQLTDPLRVLPKDEAVEKVVYFMDLYS
INMEDLDTIVELSKFKGHPNPLDGIQPAVKAALTRAYNKGSSSRVIKTADFITLPGMKKA
PKKRVAAMLEPVDDALVEENATVSAENEEEILSDTGDQDDSSDDEKMVESDLRSLNSKAI
KVEMELKGSGNSSAKKAPAGRGRGKGSAGVAAATSDQKGGRGTGSGSKRKR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatataaggaaatggttcatgaagcaacatgaaaaaggtgctgggaatgacaat
tcatcgaagccagctaagtcctcgactctcgaaaaacctcctggtgtcgacccacagcct
gaaaaagtggcacaaggagaagattttcttggtagaaggaaaacaagcaaatattttgct
aaagataaacaaaatgtcgaagatgagaccggtgttaaggaagtttctacaaaaaggaag
ggtcgaggtgatggtggtgtgttgtctaaggaattaaagcctccaccggagaaaaaaatc
cacaaaattgagattgacgatgaagatagagatttcatctcatcttcctcaaggaggagt
acaatgggtaccactcctggcaagaggagaattggttctgtaacaaaaagttctcgaaag
tttagtgcggaaagtgatgacgatgattatgcagaaataaaatcgaactcaaatgctgct
ggaaagggtcgtggtgcaaaagattcttcagccactcctataaatgcaaaaagtacagat
gttgctggaagcgaggaagaggatcttgacgataaggatgttaaatctgtaaaatctggc
ggacgaagccgtggtggaagaggtgtcccagcaagtgcgaaaggaagaggtggtggaggt
aggggtggattcatgaactttggggagaggaaagatcctcctcataaaggagagaaggaa
gttcctgaaggtgctgctagctgtttagatggtttgacttttgtgatcagcggaacactc
gacagtttggaaagagaagaagctgaagatttgatcaagcgtcacggtgggcgtgttact
ggatctgtcagcaaaaagacgaattatcttctatgtgatgaagatattggcggacggaag
tccgagaaggccaaagaacttggcaccgtctttcttacagaggatggtttatttgacatg
attcgtgcatcaaataattcagcaactgcaatgcaagcaacaaagaagacaccagataag
gttgttccatctcctacaaagaagagccttcaaaagccagaacaattgaaacaagttggc
catattgttgcaagcaaggatgccaaaggtttgacgtcttctgctgtttattccaaacta
ccatccacacaaaatctgttgccatggactgaaaaatataagccaaaggttcctaatgat
attgttgggaatcagtcattggtgaaacagcttcatgattggctcgcaaattggaatcaa
caattccttaatgcaggacaaaaaggaaaaggaaagaagccgaatgattctggtgctaaa
aagtgtgtattgttaagtgggacaccaggcattgggaaaacaacatctgcgaagttggtt
agtcagatgcttggtttccgtgcaattgaggttaatgcaagtgacagtcgtggaaaggct
gatgctaaaattcagaaaggaattggtggaagtacttctaattctatcaaagaacttatc
agcaatgaaggcttgaatcctaacatggaacgttctcagaacccaaatactgttcttatc
atggatgaggttgatggcatgtctgctggagatagaggtggaatagcggatcttattgcc
agtatcaagatttcaaaaattcctattatatgcatctgtaatgatcgctatagccagaaa
cttaaaagcctagtgaactactgcttactccttagctatcgtaaaccaacaaagcagcag
atggcgaaaagattatcacagatagtaaatgcagaacacctccaagttaatgagattgcg
ctggaggaactggcagaaagagtcaatggagatatgcgaatggccctgaaccagttgcag
tatatgagtctctctttggcagtccttaattttgatgatatcaagcagcgccttcaaaac
agttccaaggatgaagatatttcacccttcacggctgttgataaattatttggcttcaat
ggtgggaagttgcgaatggatgagagaattgaccttagcatgagtgatcccgatcttgtc
ccgcttcttattcaggaaaattatatcaattataggccaagttcatccggtaaagatgat
aaccaactgaaaagaatgagcctacttgctcgtgctgctgaatctattgctgatggtgat
attgttaatgttcaaattcgaagataccgtcagtggcagctatctcagattggttctctt
gcatcttgtataatccctgcagctctgttacatgggcaacgggaaatacttgagcaggga
gaacgcaatttcaatagatttggtggatggctgggaaaaaattctaccgcagggaagaat
tacagacttttagaggacctgcatgttcatcttctttcatctcgtgaatctaatttagga
agggcaactttgcgattggactatcatactcttctcctgaagcagttgactgatcctttg
agggtgctacctaaggatgaagccgttgagaaagttgtctactttatggatctttactcc
attaacatggaagacttggatacgatcgttgagttgtcaaaatttaaggggcacccaaat
ccattggatggcatacagcctgctgtaaaagctgcactgacacgagcttataacaaaggt
agctcatcgcgtgtgattaagacagcagattttataactcttcctggaatgaaaaaggct
cctaagaagcgggttgcagcaatgctggaacctgtagatgacgccttagttgaagaaaat
gctactgtatctgcagaaaatgaagaagaaatcctctcagatactggggaccaagatgac
tcatctgatgatgaaaagatggtggaatcagatctgcggagtcttaattcgaaggcaatc
aaagtggaaatggagttgaagggttctggaaactcaagtgcaaaaaaggcacccgccgga
cgagggagaggtaaaggaagtgctggtgttgctgctgcaacgtcggaccagaaaggagga
cggggcaccggttctggttccaagagaaagagatga
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