Primulina huaijiensis: 140960800
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Entry
140960800 CDS
T11038
Name
(RefSeq) spliceosome-associated protein 130 A-like
KO
K12830
splicing factor 3B subunit 3
Organism
phua Primulina huaijiensis
Pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140960800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140960800
03041 Spliceosome [BR:
phua03041
]
140960800
03036 Chromosome and associated proteins [BR:
phua03036
]
140960800
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140960800
Spliceosome [BR:
phua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140960800
Complex B
140960800
Complex C
U2 SnRNP specific factors
140960800
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
140960800
TFTC complex
140960800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
140960800
NCBI-ProteinID:
XP_073275179
LinkDB
All DBs
Position
16:13670030..13676025
Genome browser
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQQATGIICAINGSFSGGKSQEIVVARGKVLDLLRPDDNGKLQSLLSVEIFGA
IRSLSQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNAFDKIHQETFGKSGCRRIVPGQYS
AIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSICGVDCGFENPV
FAAIELDYSEADQDPTGQAANEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRREDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDMFKVTLDHENDRVKELKIKYFDTIPVTSSLCVLKSGFLFAASEFGNHALYQFQAI
GDDPDVESSSATLMETEEGFQPVFFQPRKLKNLLRIDQIESLMPMMDMKVTNLFEEETPQ
IFSLCGRGPRSSLRVLRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKHEMSGDVACLDISPIPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSLQSVSAPPESLLFLEVQASTGGDDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTIERLGESFNETAIPLRYTP
RKFLVQPKRKLLVIIESDQGAFAAEEREAAKKESFESSGVGENGNIEQMENGDDEENSDP
LSDEQYGYPKAEAGKWVSCIRVLDPRSALTTCLLELQNNEAAFSMCSVNFHDKEYGTLLA
VGTAKGLQFWPKRSFEAGYIHVYRFKEDGKVLELLHKTQVDGIPLALCQFQGRLLAGIGP
VLRLYDLGKRRLLRKCENKLFPNTITSIQTYRDRIYVGDMQESFHYCKYRRDENQLYIFA
DDTVPRWLTAAQHIDFDTVAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA
PNKVEEIVQFHIGDVVTCLQKASLIPGGGECIIYGTVMGGLGAFLPFTSRDDVDFFSHLE
MHMRQEHPPLCGRDHIAYRSSYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgtacagcctaactcttcaacaagctactggcatcatctgtgccatcaatgga
agcttctctggcgggaaatcacaagaaattgtggtggcgcgtgggaaagtactcgacctc
ctgcgacccgacgacaatggtaagctacaatctcttctatctgttgaaatttttggcgct
attcgctctttatctcaatttcgcctcactggagcgcaaaaagattacattgttgttggc
tctgattctgggcgcatcgtaatccttgaatacaacaaagagaagaacgcatttgataaa
atccatcaggaaacttttgggaaatctgggtgccgtagaattgtccccggtcagtattcg
gccattgaccctaagggtagagctgtgatgattggtgcttgcgagaagcagaagcttgtt
tatgttttgaatagggatacagtagctagattgactatttcatcccctctcgaggcgcat
aagagccacactatttgttattccatttgcggggtggattgtgggtttgaaaacccagtc
tttgcagctatagaattggattattctgaggctgaccaggaccccactggtcaagcggcc
aacgaggcgcagaagaatttgactttttatgagttggatttgggtcttaaccatgtttca
aggaaatggtctgaacaggtcgataatggtgctaatatgcttgtcacagtgcctggtggt
ggggatggtccaagtggtgttcttgtgtgtgcagagaattttgtcatatataagaatcaa
gggcatccagatgtcagagcggtgattccgaggcgtgaggacttaccggctgagcgtggg
gttttgatcgtctcagctgctatgcataagcagaaatccatgtttttcttcctcttgcaa
actgagtatggggatatgtttaaagtgacgttggaccatgagaatgacagagtaaaagag
ttgaagataaaatattttgatactattcctgtcacatcatctttgtgtgtcctgaagtca
gggtttctatttgctgcatctgagtttgggaaccatgccttgtatcaatttcaggcgata
ggagatgatccagatgtggagtcatcatcagctacactgatggaaacagaagaaggtttt
cagcctgtgtttttccagcctagaaaactgaagaatctacttaggatagaccaaattgag
agtctgatgccaatgatggatatgaaagtcactaatctatttgaggaagaaactcctcag
atattttcactttgtgggcggggtcctcgttcatcactccgtgttttgagacctggtttg
gctattagtgaaatggcagtatcacagttacctggtgttccaagtgctgtgtggactgtc
aaaaagaatgtcaatgatgaatttgatgcctatattgttgtttcttttgcaaacgccact
ctcgtgctttccattggtgagactgttgaagaagtaagcgacagtgggtttcttgataca
acaccttctcttgctgtttctttgattggcgacgattctttgatgcaagtgcatcccagt
ggtattaggcatatcagggaagatgggcgtattaatgagtggagaactccaggaaagaga
actattgttaaggttgggtctaacagacttcaagttgtcattgcattgagtggaggggaa
attatatattttgaagttgacatgactggtcagttgatggaggttgagaagcatgaaatg
tcaggagatgttgcctgtttggatatttctcctatccctgaaggaagacagagatcacgg
tttcttgctgttggatcttatgataacaccattcgcattttgtctttggatcctgacgac
tgtatgcagatactaagtttgcaaagtgtttcagcacctccggaatctctcctatttctt
gaagttcaggcttctactggaggtgatgatggggctgaccaccctgcaagtctctttttg
aatgctggtttacaaaatggagttttattcaggacagtagtggatatggtgactggacag
ctgtcagatgcccgatctcggttcttaggacttagagcaccaaagctgttttctataatt
gtgagaggacggagagctatgctttgcttgtcaagtagaccttggctaggttatatacac
caaggacatttccttctcacaccattgtcatatgagactcttgaatatgctgcttcattt
tcatcggatcagtgtgcagaaggtgttgttgctgtcgctggggatgcattaaggattttt
actattgaaagacttggagaatcttttaatgaaacagccatacctttgaggtatactcct
aggaaatttttagttcaacccaaaaggaagctgttggtaataattgaaagcgatcaggga
gcattcgctgcagaagagcgtgaagctgcaaaaaaggagtccttcgagtcttctggagtg
ggggaaaacggaaacatagagcagatggagaatggtgatgatgaggaaaacagtgatcca
ctttctgatgagcagtatggatatccgaaggcggaagccggaaaatgggtttcttgcatt
agagttctggatcctaggtcagctttaacaacctgtctgctagagcttcagaataatgaa
gctgcgttcagcatgtgctctgtgaatttccacgataaggaatatggaacacttttggct
gttggaacggcaaaaggtcttcagttttggcccaaaagatccttcgaggctggatatatt
cacgtatataggtttaaagaagatggaaaagtccttgagcttttgcacaagacacaagtg
gacggtatacctctcgcattatgccaattccaaggaagattgctcgctgggattggtcct
gtacttagattgtatgatttggggaaaaggaggttgcttagaaagtgtgagaataaatta
ttccccaacacaatcacttccatccaaacctatcgcgatcgaatttatgttggggacatg
caagagtcgtttcactactgcaagtacagacgtgatgagaatcagttatatatatttgct
gatgacactgttccaagatggcttactgctgctcagcatatcgacttcgacaccgtggct
ggtgcagacaaatttggaaatatctactttgtccgattgccacaggatgtgtcagatgag
attgaagaagaccccactggtggtaagataaagtgggagcaggggaagttgaatggagca
ccgaataaagtagaggaaatagttcaatttcacattggtgatgtggtcacttgcttgcag
aaagcatctctgattcccggaggtggagagtgcatcatatatgggactgtaatgggtggt
ttgggggcattccttccatttacatcacgtgatgatgttgacttcttctctcatctggag
atgcatatgcggcaggagcacccacctttgtgtggcagagaccatattgcctacagatca
tcctattttcctgtgaaggatgttatagacggagatttgtgtgaacaattcccaaccttg
cccatggatatgcaacgtaaaattgctgatgagctggatagaactccgggggagatttta
aagaaactggaagaaataagaaataagatcatttaa
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integrated database retrieval system
