Primulina huaijiensis: 140961055
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Entry
140961055 CDS
T11038
Name
(RefSeq) protein ALTERED SEED GERMINATION 2
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
phua
Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140961055
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
140961055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
TRM82_WD
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
ARM_TT21_C
Beta-prop_WDR41
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
140961055
NCBI-ProteinID:
XP_073275476
LinkDB
All DBs
Position
16:14723327..14737569
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AA seq
752 aa
AA seq
DB search
MLSGICESAITLPPFYVQDFNKDARTHSSLLRRLSLERELEGHRGCVNALAWNSEGSLLV
SGSDDARLNIWSYSSRKLFLSIDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSR
LRGREQDGGGINPLALFQCHTRRVKKLAVEAGNPNVVWSASEDGTLRQHDFRECASCPAA
GSPHQECRNVLLDLRCGAKKSLADPPKHVLMLKSCDISNARPHLLLVGGSDSFVRLYDRR
MLPPMSSSQKKMPSPPCVNYFCPMHLSDLGNFSLHLTHVAFSPNGEEVLLSYSGEHVYLM
DANLASGSTMRYTSEDVTKLISFYPPHGGADLHSSAWGISLNGFPVRSKISAKVKKCRKL
IQIAQRTLKGELDFYYGIEACNEVLAFLGLEIEPTVVLECLCIRASLLLKRRWKNDVHMA
IRDCYQARKIDPSSVMALICMAEGLTMLNKHNQALDFAIAAQALAPSDFEVMEKVENIKK
SIAAVEIEADMHGDGGSKSEYQSGRVLSLSDIIYHSEADSALLDGPEREDSDYEELELDF
ETSISGEGGDSVDSAILDRNLNLRIRRRDATALENGRPNDTCGLLQLSRENDKVPYQPET
ITDMKQRYIGHCNIGTDIKQASFIGRRGEYVASGSDDGRWFIWEKKSGRLLKMLRGDEAV
VNCIQCHPYDCVIATSGIDSTIKIWTPNSPVPSIVAGGAAGPETSNVLDAMEENQRRLCR
TREAILPFEILERFRMHEFAEGRFHPFECTQS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgttatctggaatttgtgaaagtgcgattactcttcctccattttatgtccaggatttt
aataaagatgcgcgaacacattcctcactcctgcgaaggctgtcactagaaagagaactg
gaggggcaccgtggttgtgtaaatgctttggcatggaattcagaaggttcgctgttggta
tcaggatccgatgatgcacgacttaatatttggtcttattcaagccgaaaactttttctc
tccattgacaccggccattctgctaacatattctgtacaaaatttgttcccgaaacttca
gatgaattggttgtttctggggcaggggatgctgaggtgcgactattcaatttatctcgt
ttaaggggcagagaacaggatggtggtggaatcaacccattagcactttttcaatgtcac
acaaggagggttaaaaaattagccgtggaagccgggaatcccaatgtggtgtggagtgcc
agtgaagatgggacactgagacaacatgattttcgtgaatgtgcttcatgccctgctgct
gggtcccctcaccaagaatgtcgtaacgtccttcttgatttgcggtgtggagctaaaaaa
tcattagcagatccccccaaacatgtgcttatgttgaagtcttgtgatatcagtaatgct
agacctcatttacttctcgttggcggcagtgattcatttgtgcgtttgtatgatagacga
atgctaccgccaatgtcttctagtcaaaaaaagatgccatcgccaccatgcgtcaattac
ttctgcccaatgcatctttctgaccttggtaattttagcttgcatcttactcatgtcgct
tttagtcctaatggtgaggaggttcttcttagttacagtggtgagcatgtgtacttgatg
gatgcaaatcttgcttctgggagtacaatgaggtacacgtcagaagacgtcacaaagctt
atcagcttttatcccccacacggtggagcagatttacactcctctgcatggggcatatct
ctgaacggttttcctgtaagaagcaagatttctgcaaaggttaaaaagtgcaggaagttg
atccagattgcacagagaactttaaaaggagaattggatttttattatggaattgaggct
tgtaatgaagttttagcttttcttggtcttgagattgagccgactgttgtgctcgaatgt
ttgtgtattcgtgcatccttattgctcaagcggagatggaaaaatgatgtgcacatggct
atcagggactgctatcaagcccggaaaatcgatccttcgtcagttatggcattaatttgt
atggctgaaggcttgaccatgttaaacaagcacaaccaagccttggactttgctattgca
gctcaagctctagctccatcggattttgaagtcatggaaaaggtggaaaatataaagaag
agcatcgctgcagttgaaattgaagctgacatgcatggcgatggagggtcgaagtctgaa
tatcaatctggaagagtactttctctgagtgatattatctaccattcagaagcagacagt
gctttactagatggtccagaaagagaagactctgactatgaagaactagaattggatttt
gaaacatcaatatcgggtgaaggaggagatagtgttgactctgctattcttgataggaac
ttgaatttaagaattcgcaggagagatgctacagccttggaaaatggaagacctaacgat
acttgtgggttgctccaattgtcaagagaaaatgataaagttccatatcagcccgagacc
ataacagatatgaagcagagatatattggtcactgtaacataggcacagacataaaacaa
gctagttttattgggcgaagaggtgaatatgttgccagtggaagtgatgacggaagatgg
tttatttgggaaaaaaaatctggccgattattaaagatgctgcgtggagatgaagctgtt
gtgaactgtatacaatgccatccatatgactgtgtcatcgcaacaagtggaattgacagc
accataaagatctggactccaaattctcccgtcccttctattgtagctgggggagcagca
ggaccagagacttcaaatgtattagatgccatggaagaaaatcaacgcagattatgtcgc
actcgggaagcaattttgcctttcgaaatcctggagcggttccgcatgcatgagtttgct
gaaggaaggtttcatccatttgagtgcacacaaagctaa
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