Primulina huaijiensis: 140961667
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Entry
140961667 CDS
T11038
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
phua Primulina huaijiensis
Pathway
phua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140961667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140961667
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140961667
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_Zer-1
Dimerisation2-like_dom
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
140961667
NCBI-ProteinID:
XP_073276426
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Position
16:complement(16627940..16630485)
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AA seq
379 aa
AA seq
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MGEKGEVLGLDFEKLMVFGDVGCVNENEIVVCQVGGGLCGGSKMSEWKDIPVELLLRILS
LVDDPTVIVASGVCHGWRDAISWGLTHLSLSWCKKNMNDLVLSLVPKFTKLQVLILRQDS
PQLQDVAVETITNHCSDLQELDLSKSFRLTDRSLYALALGCPNLMKLNISGCSAFSDTAV
AYLSGFCRKLKILNLCGCVKAASDRALKAIGYNCHQLQSINIGWCDRVGDEGVKSLAYGC
PDLRALDLCGCVLVTDESVVALANNCLHLRSLGLYYCKNITDRAMYSLAHSRVKNKHDIW
ASVKKNIYEEEGLTNLNISQCTALTPHAVQVLCDSFPALHTCSGRHSLIISGCLSLTSVH
CACAVQAHRATHAMAHLAH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaaaaggggaggttctgggcttggattttgagaagctgatggtttttggtgat
gtggggtgtgtgaatgaaaatgaaattgtggtttgtcaagttgggggaggtctttgtgga
ggatcgaagatgagtgagtggaaagatattccagtggagcttttgttgaggattctttct
ttggtggatgatcccacggtgattgtggcatctggtgtttgtcatggatggagggatgcc
atttcttggggcctcactcatctctccctctcttggtgcaagaagaacatgaatgatctg
gtgctatcactggttccaaaattcacaaaacttcaggtccttattctgcgacaagactcg
cctcaacttcaggacgttgctgttgaaacaatcacaaatcattgtagtgacctccaagag
ttggatctgagcaagagtttcaggcttactgatcgatccttgtatgccttagcacttggc
tgccctaatctcatgaagctgaacataagtggctgttcggctttcagtgatactgctgtg
gcgtatttgtctgggttttgccgaaaattgaaaatcttgaatctttgtggatgtgtcaag
gctgcctcagatagggcattgaaggccatcggttacaattgtcatcaattgcagtcgata
aacataggatggtgtgaccgagttggtgatgaaggggttaagagtttagcctatggttgt
cctgatctccgagctctcgacttgtgtggatgtgttcttgtaacagatgagagtgttgtc
gccttggcaaacaactgccttcatctgcgatccctcggtttatactactgcaagaatatc
accgacagagccatgtattctctggcacatagccgagtgaaaaacaagcatgatatatgg
gcatctgtgaagaagaacatatacgaggaggaaggtcttacgaacctgaacatcagccaa
tgcactgcccttactcctcacgcagtgcaggtactatgtgactcgtttccagctcttcat
acatgttccggtcgccattcccttataatcagtgggtgcctgagcttgacgtcagtgcat
tgtgcatgtgctgtccaagctcaccgtgccacacatgcaatggctcatctagctcactga
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