Primulina huaijiensis: 140961923
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Entry
140961923 CDS
T11038
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1 isoform X1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phua03041
]
140961923
Spliceosome [BR:
phua03041
]
Complex B
Other components
Complex B specific factors
140961923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
ANAPC4_WD40
LisH_TPL
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_ACSF4
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_SCAP
Ge1_WD40
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
DUF7165
Beta-prop_LRRK2
VPS8_N
Beta-prop_HPS5
Beta-prop_IFT122_2nd
Beta-prop_IP5PC_F
WD40_like
7TMR-HDED
zf_topless
DUF6799
Motif
Other DBs
NCBI-GeneID:
140961923
NCBI-ProteinID:
XP_073276811
LinkDB
All DBs
Position
16:17101396..17107598
Genome browser
AA seq
514 aa
AA seq
DB search
MSSTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETLTGDINSGRWDA
ILPQLAQLKLPRKKLEDLYEQIVLEMIELREIDTARAILRQTQVMGVMKQEQPERYLRLE
HLLVRTYFDPNEVYQDSSKEKRRSQIAQAVASEVSVVPPSRLMALIGQALKWQQHQGLLP
PGTQFDLFRGTAAMKQDVEDMYPTTLGHTIKFGKNSHPECARFSPDGQFLVSCSVDGFIE
VWDHVSGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCL
RRLERAHSDGVTSVAFSRDGTQLLSASFDSTARIHGMKSGKMLKEFRGHTSYVNDAIFTN
DGSCVVTASSDCTVKVWDMKTTDCLQTFKPPPPLRGGDASVNSIHLFPKNTDHIIVCNKT
SSIYIMTLQGQVVKSFSSGKREGGDFLAACVSPKGEWIYCVGEDRNLYCFSQQSGKLEHL
MKVHEKDVIGIAHHPHINLVATYGADCSMKLWKP
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacgcttgaaattgaagctcgggatgtaataaagattgttcttcaattctgc
aaagagaattccttgcatcaaacgttccaaactttacagaatgaatgccaagtttctctc
aacacggtggacagtctcgaaacacttaccggtgacatcaatagtggaaggtgggatgcg
attttaccgcaattggcacagcttaagcttcctcgtaagaagcttgaagatctttatgag
cagattgttttggaaatgattgaacttcgagaaattgatacagcacgcgctatattaagg
caaacccaggtgatgggtgtcatgaaacaggagcagccggaacgatacttacggcttgag
catctactagttcggacttactttgatcccaatgaggtgtatcaagactcatcaaaggaa
aagcgccgttctcaaatagcacaagctgtcgcttcagaagtttcagtggttccaccttca
cgtttaatggctttgatcggtcaagctctaaagtggcagcagcaccaaggtttacttccg
cctggaacacaatttgatctgtttcgaggaacagctgccatgaaacaagatgtggaggat
atgtatccaacaactcttgggcatactataaagtttgggaagaacagtcatccggagtgt
gcccggttctctccagatggacaattccttgtttcttgttcagttgatggatttattgag
gtttgggatcatgtaagtggtaaactaaaaaaggatcttcaataccaggctgatgaaaca
ttcatgatgcatgatgatcctgtcctgtgtgttgatttcagtagagactcagagatgcta
gcttctggatcacaggatggaaaaataaaggtttggcgtatcaggactggccagtgcttg
cgtcgtcttgaacgagcacattctgatggtgtcactagtgttgccttttctcgcgatgga
acacagttgttaagcgcctcatttgacagcacagccagaattcatggtatgaagtcagga
aagatgttgaaagagtttcgtggccatacatcttatgttaatgatgccatctttaccaat
gatggttcttgtgttgtaactgcctcaagtgattgcactgtgaaagtttgggatatgaag
accacagactgtttgcagaccttcaagccaccacctcctctaaggggaggtgatgcatct
gtgaattccattcatcttttccctaaaaacactgatcatataattgtgtgcaataagaca
tcatcaatatatatcatgacacttcaagggcaggttgtgaaaagtttttcatctggtaaa
agagaaggtggagatttcctggcagcttgtgtatcacccaaaggggaatggatctactgt
gttggtgaagacagaaatttatactgcttcagtcagcaatctggaaaactagagcatttg
atgaaggtacacgaaaaggacgtgattggtattgctcaccatcctcatataaaccttgtt
gcaacttatggggccgactgcagtatgaaattatggaagccataa
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