Primulina huaijiensis: 140962701
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Entry
140962701 CDS
T11038
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
phua Primulina huaijiensis
Pathway
phua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
140962701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140962701
Enzymes [BR:
phua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
140962701
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
140962701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
140962701
NCBI-ProteinID:
XP_073277759
LinkDB
All DBs
Position
17:complement(4007267..4039374)
Genome browser
AA seq
1715 aa
AA seq
DB search
MAQASEGTTEAVEAVRFGFMTDEEVKNHSVVKITNPDLLDTLEKPIPGGLYDYALGPLHE
DSRCKTCGQRQYNCAGHCGHIDLVSPAYNPLLFNLLQIILNKTCFYCFHFRSAREEVKNC
VSQLKLISEGDIIGAKKFGLTRKLQYKEKYAWILSLCTDEAEDSQGSCASYLSERSGSRN
NYDHHKKPHWDSSMLTESISVLNEFLKKKSKKCKNCQCSNPNISRPTFGWLHLVGLTDNQ
IRSNHILRSRLNVPYDGGEDNKHPSEVVNASDCSGFDDDLEITEANSFVALSDGGEKLSK
SHVTHKRSKNIGSEEVPISNLKGPLLPSEVRDTLRRLWDNEAPLCSFICNIQQQCEQSEK
TQGHYMFFLETILVPPIKFRPPAKGGDSIMEHPHTLLLGKVLQSNIALGNAHVNNAEHSK
IINRWMELQRSINVLFDSKTAGSQGQKDVTSGICQLLEKKDGIFRQKMMGKRVNFACRSV
ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNSAKLRGSVINGPEIHPGATIYVDSVATA
RLPPGNGKARMAISRKLPSSRGAITQSGKSNDLEFEGKIVYRHLQDGDIVLVNRQPTLHK
PSIMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQY
IVPTRGDTVRGLIQDHIVGAVLLTMKDTFITRSEFSQLLYGSGVFAGGPGILPGNHALKI
SLVASEGLVESVLPTVWKPEPLWTGKQVISALLNHVTRGCAPCTIKNQGKIPKNYFTENN
CKNEEEDEDQNAEHKLLIWKNELVHGVIDKAQFGKFGLVHTVQELYGSNSAGMLLSALSR
LFTVFLQIHGFTCGLDDLIILPHFDVQRKEKLEGDDVGEEVHCDFVKFKPGQIGTEELQL
EIEKAICADRESATASLDVKMKNKLTNKLTREGSQILKHLLTAGLLKPFPRNCISVMTTT
GAKGSTVNFQQISAYLGQQELEGKRVPRMVSGKTLPSFPPWDFTSRAGGFITDRFLTGLR
PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYG
EDGVDVHQTSFLRNFDALEDNKGPIFQKFQIEREFNAYIEKLPEGLEEEANRYIEIAKKK
SEIGKMNVINKLHKRQKATSNKHLSDKPMTTVKKPDKFINLVKQKYLSSLAQAGEPVGVI
AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASEEIRTPILTCPFMQWRLK
SDVVSLVSNVKKVTVADLLESMEVQLSVDHRKQARIYKLIIKLKDSEFVSLEDTHETLNS
VFIKELDDAIENQVVFLSRILGIKNFKSSSRADELNEIDGDSGVGTQEKDDDDDGEQDAG
DDLGSDVQKRKQQATDEMDYEDGSDVEPGEHELPAEQEKRITEDDHLEDEETRKEEETED
SANDNEESNVINEDEAASVAKSNSKSRKMSKLVKTGKLSDKMRRARYAAAEGLSFEVHFK
FTEEPHLLLAQLAQKTAKKVYIKRAGKISQCKMVRYDADEKTVIWDDNKKQKGDPENPLT
DGEDAAAYWAVKAFGVDFKSFWEMHEDLDTSRLYSNNIHAMLQTYGVEAARATIIREVKQ
VFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSPFLKMSFETASKFIVEAAS
HGLTDDLETPSSRVCLGLPVKMGTGCFDLMQKLEA
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagcatctgaggggacgacggaggctgttgaggcagtgagatttggtttcatg
acagatgaagaagtgaagaatcatagtgttgttaagattactaatcccgacctgctcgac
actctcgagaagccaattcccggtggactatatgattatgccttgggtcctcttcatgaa
gattctcggtgtaaaacatgtggtcagaggcaatataactgtgctggtcattgtggtcac
atcgatctcgtttcaccggcatataatcctttgctgtttaacttgctgcaaattatcctt
aataaaacctgtttttactgctttcatttccgatcagctagagaagaggtgaagaattgt
gtttctcaattgaaactgatttcagagggtgatatcattggggcaaaaaagtttggtttg
acacgaaagttacaatacaaagagaagtatgcttggatcttatcattgtgtacagatgaa
gcagaagatagtcaagggagttgtgcctcatacttatcagaacgctctggtagtcgaaat
aactatgaccatcataagaagcctcattgggattcttctatgctcacggaatctatttct
gtcctgaatgagtttttaaagaaaaagagtaagaagtgcaagaattgtcaatgcagtaat
ccaaatatcagtcgaccaacttttggatggttgcatctggttggactcacagataatcaa
attcggtccaatcacatactacgtagcagattgaatgtgccttacgatgggggagaagat
aataagcatccatctgaggtggttaatgctagtgactgctcaggatttgatgatgatctt
gagatcactgaggcaaattcatttgtagctttatctgatggtggtgaaaagctcagtaaa
agtcacgtgacccataaaagaagtaagaatattggttctgaagaagtgccaattagtaat
ttaaaagggcctctgttgccatcagaggttagagacactttgcgtcgcttgtgggataat
gaagctcctctttgctcattcatatgtaatattcagcagcaatgtgaacaatctgagaaa
acacaaggtcactatatgtttttcctagagactattcttgtaccccccataaaattccga
cctccggctaaaggtggtgattccataatggagcatcctcatactcttctgttgggtaag
gtactgcagtcaaacattgctttaggaaatgctcatgttaataatgctgaacattcaaag
atcattaatcgctggatggagcttcagcgatctatcaatgtgttatttgatagcaaaact
gcaggcagtcaaggtcaaaaagatgtcacttctggaatttgccagctgctggagaagaaa
gatggtattttccgtcagaagatgatggggaagagggtcaatttcgcttgccggtctgtt
atatctccagatccttatttggcagttaatgaaattggaattcctccatattttgctttg
agactaacctatcctgagagggttactccttggaattctgctaaattgagaggttccgtc
attaatggaccagaaatccatcccggagctacaatatatgttgatagtgtagccactgca
aggctgccccctggcaacggaaaagctcgaatggcaatatctaggaaattaccttcttca
agaggggcaattacacaatcagggaagagcaatgaccttgaatttgagggcaagatcgtg
tatcgccacttgcaggatggagatatcgtgcttgtgaatcgccagcctacactccacaag
ccaagtattatggctcacgttgttcgtgtattaaaaggagagaaaacgctgcgcatgcat
tatgcaaattgcagctcctacaatgctgattttgatggagatgagattaacgtccatttt
cctcaagatgaaatttctcgtgctgaagcttataacattgtaaatgctaatgagcagtac
attgttccaacaaggggtgatactgtgaggggcttgattcaggatcatatcgttggtgct
gttcttctgacaatgaaggatacatttattacacgtagcgaattcagtcagctgctttat
ggatccggggtgtttgcaggtgggcctggtatacttccaggcaatcatgccttgaaaatt
tctttagtagcttccgagggtctggtggagtctgttttgcccacagtatggaaaccagag
cctctttggacaggaaagcaggtcatttcagcgttgttgaatcatgtaaccagaggctgt
gctccttgtaccattaaaaatcaggggaaaataccaaagaattatttcactgagaataat
tgcaaaaatgaagaggaagatgaagatcaaaacgctgagcacaagttgctaatttggaag
aatgagcttgtgcacggtgtgattgacaaggctcaatttggaaaattcggtctggttcac
acagtgcaagagctttatggatctaacagtgctggcatgttgctttctgcattgagtcgc
ttattcacagtctttttgcagattcatggattcacatgtgggctagatgaccttatcata
ttgcctcactttgatgtccaacggaaggagaaacttgaaggagatgatgttggtgaagag
gttcactgtgattttgtgaagttcaaacctggacaaataggcaccgaagaactgcagttg
gaaattgagaaagccatatgtgctgaccgagaatctgccacagcatcgttggatgttaaa
atgaaaaataaattgacaaataagctcactagagaaggttctcagatactcaaacattta
cttacagccggattgttaaaaccattcccgaggaactgtatttctgttatgacgacaacc
ggcgcaaagggcagtacggtgaatttccaacaaatatctgcctatctagggcaacaggag
ttggaaggtaaaagggttccccgcatggtgtctgggaagactttgccatcatttccaccc
tgggacttcacttctagagcaggggggttcatcactgatcgttttcttactggtcttcga
cctcaggaatattattttcattgcatggctggtcgtgaagggttagttgatactgcagta
aaaacatctcgcagtggatatttacagcggtgcctgataaaaaatcttgagagcctgaaa
gtttgttatgattatacagtccgtgatgctgatggttccatcattcaattctattatgga
gaagatggagttgatgtgcaccagacaagctttctaagaaattttgatgcactagaagat
aataaagggccgattttccagaagtttcaaattgagcgtgagttcaatgcttacattgaa
aagttgcctgagggccttgaagaagaagccaatcgctatattgaaattgcaaaaaagaaa
tcagaaatagggaagatgaatgtgatcaataaacttcataaaagacaaaaggcaacaagt
aacaagcatctatcagataaaccgatgacaactgtaaagaagccagacaagttcataaat
ttggtgaagcaaaagtatctatcaagcctagcacaagcaggagaacctgttggcgtcatt
gctgctcagtctgtaggggaaccatcaacccagatgacgctcaatacatttcatcttgct
ggccgtggtgaaatgaatgttacgcttggtataccacgtctccaggaaattttgatgact
gcatcagaagaaatcaggactcctattttgacgtgcccattcatgcaatggagattgaag
tctgatgtcgtgtctcttgtttcaaatgtgaagaaggtcactgtagcagatttgttggag
agtatggaagttcaactatcagtcgatcaccgtaaacaagctagaatctataagctgata
attaaattaaaagattccgagtttgtttctttagaagacacgcacgaaactctcaactct
gtgttcataaaggaattggatgatgcaatagagaatcaagtcgtttttctatcacgaatc
ttaggaattaaaaatttcaagtccagttctagagcagatgagttgaacgaaatcgatggc
gattctggtgttggaacgcaagaaaaggatgatgatgatgatggagaacaggatgccgga
gatgaccttggttcagatgtacaaaagagaaagcaacaagctacggatgagatggattat
gaggatggatctgatgttgaacctggtgaacatgagttaccggcggaacaggaaaaaaga
attaccgaggatgaccatcttgaggatgaagaaaccaggaaagaagaagaaactgaagac
tcggcaaatgacaatgaggagtctaatgtgataaatgaggatgaagctgcctcagtagct
aaatcaaatagcaaaagtcgtaaaatgtcaaaactagtgaagacaggaaaattatctgat
aagatgcgtagggcaagatacgctgccgccgaaggcttgtcttttgaagtgcacttcaaa
tttaccgaggaacctcatttacttcttgctcagcttgcccaaaaaacggcgaagaaggta
tacatcaagagagctggcaagatcagtcagtgtaaaatggtacgatacgatgcagatgaa
aaaacggtcatttgggatgataataaaaaacagaagggtgatcctgaaaacccactaact
gatggagaggatgctgccgcctattgggcagtaaaggcattcggagttgatttcaaatct
ttctgggaaatgcatgaagaccttgatacgagccgtctatattccaacaatatccatgca
atgttgcagacatatggagtagaagctgccagagccaccattataagagaggtgaagcaa
gtttttgatatttatggagtaaagattgattataggcatttaagcttgatagcggactac
atgacgcacactggtggataccggccgatgagcagacacggaagcatttccgagtctctg
tcgccgtttcttaagatgtcatttgagacggcatctaagtttattgttgaagctgcatct
cacgggctaacagatgacttggagacgccgtcttctagagtttgtctgggcttacctgtg
aagatggggactggttgttttgacttgatgcaaaaattggaagcttga
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integrated database retrieval system
