Primulina huaijiensis: 140963858
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Entry
140963858 CDS
T11038
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
phua Primulina huaijiensis
Pathway
phua04120
Ubiquitin mediated proteolysis
phua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140963858
04120 Ubiquitin mediated proteolysis
140963858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140963858
Enzymes [BR:
phua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140963858
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
U-box type E3
140963858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
140963858
NCBI-ProteinID:
XP_073279419
LinkDB
All DBs
Position
18:complement(356729..364729)
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AA seq
1036 aa
AA seq
DB search
MATQRPQRTPAEIEDIILRKIFMVSLVDSMENDYRIVYLEMTAAEIMSEGKDLKLSRELM
ERVVIDRLSGDFPAAEPPFQHLLNCYRRAYEEGKKIASMKDKNVRGEMELVVKQAKKLAV
SYCRIHLGNPDMFPNHQTNKSNVSPLLPLVFSEVGSNLDAFGGTSTGISCPPGFLDEFFR
DADYDSMEPVLKQLYEDLRGTVLTVSALGNFQQPLRALLLLVKYPLGAKALVNHPWWIPK
GVYLNGRVIEMTSILGPFFHVSALPDHAIFKSEPDVGQQCFSEASTRRPADLLSSFTTIK
TVMNSLYDVLAEVLMCLLKNTNTRENVLEYIAEVINRNSSRAHLQVDPLSCASSGMFVNL
SAVMLRLCEPFLDANLSKRDKIDPKYVFHYSRLEMRGLTALHASSEEVSEWINNNASKVD
TATNNNDEQYRLLQSQEATSSSSNANVPSILNKNPVSTSSGNAKYPFICECFFMTARVLN
LGLLKAFSDFKNLVQDISRSEDTLSSFKAMLEQAPSPQLQQDISRLEKEIELYSQEKLCY
EAQMLRDGGLLQHALSYYRLMVVWLVGLVGGFKMPLQSPCPMEFSSMPEHFVEDTMELLI
YASRIPRALDGVILDDFMNFIIMFMASVEYIRNPYLRAKMVEVLNCWMPQRSGSKATETL
FEGHQLSLEYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNVWRK
IAKEEEKGVYLNFLNFLINDSIYLLDESLNKILEHKELEAEMSNATEWERRPAQERQERT
RLFQSQENIIRIDMKLANEDVSMMAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQR
KSLSLKDPEKYEFRPKLLLKQIVNIYVNLERGDEDNSFAVAITKDGRSYNEQLFGAAADV
LRRIGEDAKIVQEFVDLGVKAKLVASEAMDAEAALGDIPDEFLDPIQYTLMRDPVVLPSS
KITVDRHVIQRHLLSDSTDPFNRSHLTGDMLIPNVELKAQIQEFIKSQDVKRHGQDSNMQ
NTKATIQTTDTTNLIK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcaaaggcctcaaagaacccctgcagaaatcgaggatatcatcctccggaaa
atattcatggtatccctcgtcgattccatggagaacgattatcgaattgtatatctagag
atgacggcggcagagattatgagcgagggtaaggacctcaaactttcgcgagaactgatg
gagagagtggtaatcgaccgcctatccggcgacttccccgctgccgagccgccgtttcag
cacttgctcaattgctatcgtcgagcctacgaagaagggaagaaaatcgcgtcgatgaag
gataaaaacgtcagaggagagatggagctagtggtgaagcaagctaagaaattggcagtt
tcatactgtagaattcacttagggaatcccgatatgtttcccaatcaccagacgaataaa
tcgaatgtctcgccattgttgccgttggttttttctgaggttgggagtaaccttgatgct
tttggagggaccagtactggaatttcgtgtcctccaggattcttagatgaattttttaga
gatgcagattatgattcaatggaacctgttttaaagcaattgtacgaggatttgagaggg
actgtcttgacagtttctgctttggggaactttcagcagccattgagggcgttgttgttg
ttggtgaagtatccattgggtgcaaaagctttagtcaatcatccatggtggattcccaag
ggcgtgtatttgaacgggagagtgattgagatgaccagtatattggggccgttttttcat
gttagtgcattacctgatcatgctatcttcaagagtgaacctgatgttggtcaacagtgc
ttctcagaagcatctactcgccgtcccgcagaccttttatcatcctttacaactatcaaa
actgtgatgaacagtttgtatgatgtgttggctgaggttctcatgtgtctgcttaagaat
acgaatactcgtgagaatgttctcgagtacattgcagaggttatcaataggaactcttca
agggctcatttgcaggtcgatcctttgtcttgtgctagttctggcatgtttgtaaatctc
agtgctgtgatgcttcgtttgtgtgagccattccttgatgccaatttatccaaaagggac
aaaattgatccaaaatacgtgtttcactatagccgcttggagatgagaggattgacagct
ctgcatgcatcatcggaagaagtatctgagtggattaataataatgcttcaaaagttgat
actgcaacaaataataacgatgaacaatatcggttgctacaatctcaagaagctacaagt
tctagtagtaatgctaatgtaccttccatcctaaacaagaatcctgtttccacaagtagt
ggaaatgccaaatatccattcatttgtgaatgcttcttcatgactgctagggtgcttaac
ttggggctgctgaaagcattttcagacttcaaaaatcttgttcaggacatttctagatct
gaagataccctatcctctttcaaagcaatgctagagcaagctccttctccacaactgcag
caagatatatcacgccttgaaaaagaaattgagttgtactcacaggagaagctatgctat
gaggctcagatgttaagggatggcgggctccttcagcatgctttgtcttattaccgctta
atggttgtttggttggttgggttagtaggtggttttaaaatgcctctacagtcgccttgc
cctatggaattttcctcgatgccagagcattttgtggaagatacgatggagttgcttatt
tatgcttcacgaattcctagagctctggatggggttatactggatgattttatgaacttc
atcattatgttcatggccagcgtggaatacatcagaaatccttatctaagagctaaaatg
gtagaagtcctcaattgttggatgcctcaaagaagtggctcaaaggcaacagaaacattg
tttgaaggacatcaattgtctcttgaatatcttgtgaagaatcttctgaagctttatgtt
gatattgaattcacaggttcccatactcagttctatgacaagttcaatatccgtcacaat
atcgccgaactccttgagtacttatggcaggttcctagccaccgtaatgtctggagaaag
attgctaaggaagaagagaagggtgtctatttgaactttttgaactttttgatcaatgat
agtatctatctgttggatgaaagtcttaataaaattctggaacataaagaactggaagcc
gagatgtcaaatgcaacagaatgggagagaagaccagctcaagagaggcaggagagaact
cggttgttccaatctcaggagaatatcattaggattgatatgaaattggcaaatgaagat
gtgagcatgatggcatttacttccgagcagattacagctccttttctacttccagagatg
gtcgaaagagttgctagcatgctgaattactttttgttacaacttgtggggccccaaaga
aaatctcttagcttgaaagaccctgagaagtacgagtttcgacctaaattgttgctaaaa
cagatagtaaatatatatgtcaacctggagagaggagatgaggataacagtttcgcagtg
gccataacaaaagatggtcgatcatacaacgagcagttatttggtgctgcagctgatgtt
ttgaggagaattggcgaagatgctaaaatcgttcaagagtttgttgaccttggagtgaaa
gcgaaacttgtcgcttcagaggcaatggatgctgaagctgcccttggagacataccggat
gaattcctggatcccattcagtacaccttgatgagggatccagtcgttttgccttcgtca
aaaatcacagtggaccgacatgttattcagaggcatcttttgagtgatagcaccgatccg
tttaatcgatctcatctcactggagacatgctcatacccaatgtagagttgaaggcacaa
atccaagaattcatcaaatcccaagatgttaagcgacacggacaggactctaatatgcaa
aacaccaaagccacgatacagacaactgatacaactaatctgattaaatag
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integrated database retrieval system
