KEGG   Primulina huaijiensis: 140964292
Entry
140964292         CDS       T11038                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
phua  Primulina huaijiensis
Pathway
phua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140964292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140964292
   03041 Spliceosome [BR:phua03041]
    140964292
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     140964292
Spliceosome [BR:phua03041]
 Complex B
  Other components
   Prp19-related factors
    140964292
 Complex C
    140964292
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 TPR_19 PPR
Other DBs
NCBI-GeneID: 140964292
NCBI-ProteinID: XP_073280035
LinkDB
Position
18:6221037..6227007
AA seq 913 aa
MAIPQELYPSEEDYLYEEEVLRNPNSVKLWWRYLIARGEAPFRKRAIIYERALKALPGSY
KLWHAYLRERLELVRNLPINHAQYQTLNNTFERALATMHKMPRIWIMYLQSLTRQKLISR
TRHTFDRALCALPVTQHDRIWEHYLVFVSQKGVPVETSLRVYRRYLKYDPSHIEDFIEFL
VNSELWQEASERLAGVLNDDQFYSLKGKTKHRLWLELCDLLTQHASEVSGLNVDAIIRGG
IKKFTDEVGRLWTSLADYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMENMDLSDDEDNEDNENEEKEEEEVDDRLDFEKLKKSVDTFWLKDDKDVDMRLARLE
YLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKPH
TLWVAFAKLYESHRDVANARVIFDKAVQVNFKAVDHLASIWCEWAEMELRHKNFKGALDL
MRRATAEPSVEVKRRVAADGNKPVQIMLHKSLKLWTFYVDLEESLGSLESTRAVYERILD
LRIATPQIIINYSMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSK
LERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYDQATKAVPANEKMGMY
EIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKVMCSKYAELERSLGEIDRCRALYKHA
SQFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRVKRTVSASYSQTHFILPEYLMQKDQM
QTLDEAKDVLKKAGVDDDEMAALERQLVPSLNDAKVKDNGRRLGFVSGGMQNEGEPVSNR
EDIELPEESDSEDDGKVEIAQKDVPTAVFGGLVRKREESDKDVGASDSTLSESKDNDAHL
GALERIKRMKRGA
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggcgataccacaggagttgtatccaagtgaagaggattacctttacgaagaagaagtg
ctccgcaaccctaatagcgtcaaactttggtggcggtatttaattgcccgcggagaagcc
cctttccgaaagcgtgccattatttatgagcgagctctcaaggcattgccaggaagctac
aagctttggcacgcatacctccgggaacgccttgagctagttaggaatctgcctattaat
catgcacagtaccaaaccttgaacaacacgttcgagcgagctctggcgacaatgcataag
atgcctcgcatttggataatgtatttgcagtcattgactcgtcagaagttgatttccagg
acgcggcacacctttgatagagctttgtgcgctctcccagttacccaacatgataggatt
tgggaacattatttagtatttgtttcgcagaagggtgtacctgttgaaacttcattgaga
gtgtacaggaggtacttgaagtatgacccgagtcatattgaggattttattgagtttttg
gttaattcagagttgtggcaggaagcttcagagaggctggcaggggttttgaatgacgat
caattttactctctaaaggggaagacaaagcacaggttgtggctggaattgtgcgacctg
ttgacacaacatgctagtgaggtatcagggttgaatgtggatgcaataattcggggagga
attaagaagtttacggatgaggttggcagactttggacatcattggcggattattatatt
aggaggggattactggagaaggccagagatatttttgaggaagggatgactacagtgatt
acggtaagggattttagtgttatatttgatgcatattctcagtttgaagagagtatgttg
tccattaagatggaaaatatggatcttagtgatgacgaggataacgaggataatgaaaat
gaagagaaggaagaggaggaggtggatgataggttggattttgagaagttgaagaagagc
gttgacacattttggttgaaggatgacaaggatgtggatatgaggttggcaaggttggag
tatctgatggataggagaccagagttagctaacagtgtgctcttgaggcaaaatcctcat
aatgtagagcagtggcaccggagggttaagctctttgaagggaaccccacgaagcaaatt
ttgacttacacagaagcagtgaggacagtagatccaatgaaggctgttgggaagccacat
actttgtgggttgcatttgctaagttgtacgagagtcaccgagatgttgctaatgcccgg
gtgatttttgacaaggcagtgcaggtcaattttaaggctgtggaccatctggccagtatt
tggtgtgaatgggcggagatggagctcaggcacaaaaattttaagggtgcactagattta
atgcgtcgagctactgcagagccatcagttgaggtcaagagaagagtggctgctgatggc
aacaagccggtgcaaattatgcttcacaaatctcttaagctttggacgttctatgtggat
ttggaggaaagcttgggtagtctggagtcaactcgtgcagtttacgaaagaatattggat
ttgagaatagccacaccccaaattattataaactattcaatgctcttagaagacaacaag
tactttgaagatgcttttaaggtttatgagagaggtgtgaagattttcaaatacccccat
gtgaaagatatctgggtcacttacctttcaaagtttgtcaagagatatgggaaatcaaag
ctggaacgagcacgagagttatttgagcatgctgtcgaaatggcacctgcagaagcagtg
aaacctctgtatcttcaatatgcaaagctagaagaagactttggtctggctaaaagagca
atgagagtatacgatcaggcaacaaaagctgtgcctgctaatgagaaaatgggcatgtat
gaaatatacatagcccgtgctgctgaaatatttggtgtaccgaaaacgagagagatttat
gaacaagcaatagaatctggcctccctgacaaagatgtcaaggtcatgtgttcgaagtat
gcggagcttgagagaagccttggagaaattgaccgatgtcgtgcattatataaacacgct
tcacagtttgctgaccctagatctgaccctgacttctggaataagtggcacgaatttgaa
gtgcagcatggaaatgaagatactttccgagagatgctccgagttaaaagaactgtttct
gcaagctatagccagacacactttatccttccagagtatttgatgcaaaaggatcaaatg
cagacccttgatgaggcaaaggacgtactaaagaaagctggtgtcgatgatgatgaaatg
gctgccctcgaaaggcagttagtccctagtctcaacgatgccaaagttaaagataatggt
agacgattaggatttgtcagtggggggatgcaaaatgaaggtgagcccgtatcaaatagg
gaggatatagagcttccagaagaaagtgattctgaagacgatgggaaggttgagatagcg
cagaaagatgttccaacagctgtgtttgggggtctggtgcggaaaagagaagagtctgat
aaagacgtgggagcttctgattcaactctttctgaaagcaaagataatgatgcccatctt
ggtgccttggagagaataaaaaggatgaagcgaggtgcatag

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