Primulina huaijiensis: 140964416
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Entry
140964416 CDS
T11038
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140964416
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
140964416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
140964416
NCBI-ProteinID:
XP_073280285
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Position
18:complement(4111169..4117163)
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AA seq
619 aa
AA seq
DB search
MADLEKLLLEAAGRTTKRSRHSPPPSRRRGKGAYSDDGSDSKNDDSDDDRPYSNRKPSGS
QVPLKKRLDPTERVDRSIQEEGDGDDDSDNEHDSDNDSLGSDLYKDEDDREKLSKLTELE
REMILEARATKRSDRDLTEKFKKRNSQDRKGIPPDAHTRGMRSKAERAGALDELVKRRRD
AAKGSSGRRYSPVKRRTFTAATLSSPSRSGSESRSDEEESTGDGGMADSDEDKMSVESKL
PTYEDIKDITIRRSKLTKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCMVRNVDATDP
DRQYKLDNKTTHKFLNVVWGNESSAARWQMAMVSDSPPAKTEFDQWLREVERSGGHMPSK
QEVMEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRDLEIAKEKDDA
TEVEKINARLRELDAARQAQDKDTKAFKLAEMNRKNRVENFKNASELKPVNTGLKAGEAG
YDPFSRRWTRSRNYYVANSSGGEAVDGMKVDESAVLADSKAGMVATAAALEAAAGAGKLV
DTNAPVDQGTESNMLHNFDLQISLTVLQKFGGPQGAQGGFMARKQWIEATVGCKVPDNDG
KRHALTLTVSDYKRRRGLL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttagaaaaattgcttctcgaagcagctggaaggacaaccaagaggagccgc
cattcacctcctccgtctagaagaagggggaagggtgcatattcggatgacggaagtgat
tcaaagaatgatgattcagatgatgatcgcccttactcaaatagaaaaccttctggttcg
caggtgcctctaaagaagaggttggatcccacagaaagggttgatcgtagcattcaagaa
gaaggtgatggagatgatgattctgataatgagcatgacagcgacaatgattctcttggg
agtgatctgtacaaggatgaagatgatcgggaaaagctctcaaagctgacagagctcgag
cgagagatgatattagaagcccgtgcaacaaagagaagcgatcgagatttgactgaaaaa
ttcaagaaaaggaacagccaagatagaaaaggaatccctcctgatgcacatactcgtggc
atgcgctccaaagctgaaagggccggtgcacttgatgaattagtaaaacgaagaagagat
gctgccaaggggagttctggaaggagatattcacctgtcaagaggagaactttcactgca
gcaactctcagtagccctagtaggagtggaagtgagtctcggagtgatgaggaagaatca
actggtgacggtggtatggctgatagcgatgaagacaagatgtccgttgagtccaagttg
ccaacgtatgaggatatcaaagacattacaattcgaaggtcaaaattgacaaaatggttc
atggaacccttttttgacgaactgattgttggctgctttgtacgagttgggattggaaag
tcacggtccggtcctatttataggctttgtatggtacgtaatgttgatgccacggaccct
gatcgacagtataagcttgacaacaaaaccactcataaattcttgaatgttgtttggggc
aatgaaagctctgccgctaggtggcagatggcgatggtttctgattctccacccgccaag
acagagtttgatcaatggcttagggaggtagagcgcagtggtgggcacatgccctcaaaa
caagaggtcatggaaaagaaagaggccataaagaaaacaaattcatttgtgtactctgct
gccaccgtgaaacagatgttgcaggagaaaaaatctgccacatggaggccactgaatgtt
gcagcagagaaagatcgtctgaggagggatttggaaatcgccaaagagaaagatgatgcg
acagaggtggagaagatcaatgcaaggctgcgagaattagatgcagctcggcaagcccaa
gataaagatacaaaggcatttaagttggcagaaatgaacagaaagaacagggttgagaat
ttcaaaaatgcatccgaactgaagccagtgaatacaggcttaaaagctggcgaggctggg
tatgatcctttttctaggaggtggactagatcgagaaattattatgtggcaaattccagt
ggaggagaagctgtggatggaatgaaagttgatgaaagtgctgtcttagctgatagtaag
gctggaatggtagctactgcagcagccctcgaagctgcagctggtgcagggaagttggtg
gatacgaatgctccagtagatcaaggtactgaatcaaacatgctacataattttgacctg
cagatatcattaactgtgcttcagaaatttggtgggcctcaaggagcccaaggtggattt
atggcaaggaaacagtggattgaagccactgttggttgtaaagttccagacaatgatggg
aagaggcatgcattaacattgacagtcagtgactacaaaaggcgaagggggttgctatga
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