Primulina huaijiensis: 140965275
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Entry
140965275 CDS
T11038
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
phua Primulina huaijiensis
Pathway
phua04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140965275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phua04131
]
140965275
Membrane trafficking [BR:
phua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140965275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
140965275
NCBI-ProteinID:
XP_073281532
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Position
18:complement(1648398..1657716)
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AA seq
790 aa
AA seq
DB search
MMISDGVEDEEKWLTAGIAGIQQNAFYMHRALDSNNLKDALKYSAQMLSELRTSRLSPHK
YYALYMRAFDELRKLEIFFKEETSRGCSMVELYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQNPVRGLFLRSYLSQVSKDKLPDIGSEYEGDSDTVIDAVEFV
LQNFTEMNKLWVRMQYQGPTREREKREKERSELRDLVGKNLHVLGQIEGVDLEMYKETVL
PRVLEQVVNCKDELAQYYLMDCIIQVFPDVYHLQTLETLLNACPQLQSSVDVKTVLARLM
ERLSNYAASDFEVLPELFQVEAFAKLNNAIDKVIAAQDNMPIVGVVTLYASLLTFTLQVH
PDRLDYVDQILGACVKKLSGKERLDDSKATKLIISLLSAPLEKYKDIDTVLKLSNYPLVI
EFLNGQTNKEMANVIVQNIMKNKTCISTAEKADALFELIKGLIRDLNGFHDELDEEDFKE
EQSFVARLIQMMHSDDPEEMLKIICIVKKHILTGGAKRLPFTIPPLIFSTLKLIRRLESQ
DDSVSKEDDSAMPKKLFQIVTQTIEALSSVPVPELALGLYLQCAEAANDSDLEPVAYEFF
TQAYILYEEEITDSKAQVTTIHLIIGTLQRMHVFGVENRDALTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDENDRIRDGERVLLCLKRAQRIANAAQQMSSATRGSSGSVLLYIEILN
KYLYFYEKGISQITADLIQGLIELITSTTGGENTTLDPAADAFFASTLRYIQFQKNKGGA
VAEKYEHINV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttcagacggagttgaagatgaagaaaaatggctaactgctgggatcgccggc
attcagcagaatgctttctacatgcatcgcgctcttgattctaacaatttgaaggatgct
ctcaagtattcagctcagatgctgtccgagcttcgcacttctaggctttcccctcacaag
tactatgcgctttatatgagggcatttgatgaattgaggaaactagagatcttcttcaag
gaggagactagtcgtggctgctcaatggttgagctgtatgagctcgtccagcacgctggc
aacattttgcctagactgtacttgctctgtactgtgggttctgtttacataaaatccaaa
gaagctcctgctaaggatattctcaaagatcttgtagaaatgtgccgcggcatccagaac
cctgtgcgtgggctctttcttaggagttatctctctcaagtcagtaaagacaaattgcct
gatattggttctgaatatgaaggagattccgatacagttattgatgccgtcgaatttgtt
ctccaaaatttcacggaaatgaacaaactttgggtccgaatgcaatatcagggaccaact
cgggaaagggagaagcgggaaaaagaaaggagtgagcttcgtgatcttgttggtaaaaac
ctccatgttctcgggcagatcgagggtgttgaccttgaaatgtataaagaaactgtgctt
cccagagttttagaacaagttgtcaactgcaaagatgagcttgcccaatactacttgatg
gattgcataattcaagtctttcccgacgtttaccatctgcagacccttgaaacactgttg
aatgcttgccctcagcttcagtcctctgttgatgtaaaaacagttcttgctcggctaatg
gaaagactttcaaattatgctgcttctgattttgaagtattaccagaactttttcaagta
gaagcgtttgccaagttgaacaatgctatagacaaggtgatagcagcacaagataatatg
cctattgttggagtagtaactttgtatgcctctctattgacatttactcttcaagtacat
cctgatcggcttgattatgttgaccaaattcttggagcatgcgttaagaaactttcagga
aaagaaaggcttgatgacagcaaagcgacaaaactgatcatttctcttctaagtgctcca
cttgagaaatataaagatattgatactgtgttgaagctgtcaaattatcctcttgtcata
gaatttctaaatggtcaaacaaataaggagatggccaatgtaattgttcaaaacataatg
aaaaacaagacttgcatttcaactgccgagaaggcagatgcattgtttgaattgattaag
gggctcattagagacttgaacggctttcatgatgagcttgatgaggaggatttcaaagag
gagcagagttttgttgcacgtcttatccaaatgatgcacagcgatgatccagaagagatg
ttgaagataatctgtattgtgaagaagcatattctgacaggaggagcaaagagactgcca
tttactatccctccacttatatttagtaccttaaagttgataaggcgacttgaaagtcaa
gatgatagtgtatccaaggaagatgactcagctatgccaaaaaaattatttcagatagtg
acgcagacgattgaagctttgtccagcgttccagttcctgaactggctctggggctgtat
ctgcagtgtgctgaggctgcaaatgactctgatttagaacctgttgcatatgaatttttc
actcaagcttatattttatatgaagaagaaatcacggattcgaaagctcaagtaaccacc
atacacctaattatagggacacttcaaagaatgcatgtctttggcgttgagaacagggat
gcattaacacacaaggccacagggtattctgctaagctgttgaagaagcctgatcaatgc
agagctgtctatgcatgttcccaccttttttggcttgatgaaaatgacagaatccgggat
ggagagagggtcttgctttgcttgaaacgtgctcagagaattgcaaatgctgcgcaacaa
atgtccagtgcaactcgagggagcagcggatcagttttactctatatagaaatattaaac
aagtatctctacttctacgagaaggggatctcacagattactgctgatttaattcagggc
ttgattgaattgatcacaagtacaacaggtggtgaaaacacgacacttgatccagcagca
gatgctttttttgccagtacgctaaggtacattcaatttcagaagaacaaaggcggtgca
gtggcagagaaatacgagcatatcaatgtctaa
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