Primulina huaijiensis: 140966466
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Entry
140966466 CDS
T11038
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
phua Primulina huaijiensis
Pathway
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140966466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140966466
03041 Spliceosome [BR:
phua03041
]
140966466
03036 Chromosome and associated proteins [BR:
phua03036
]
140966466
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140966466
Spliceosome [BR:
phua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140966466
Complex B
140966466
Complex C
U2 SnRNP specific factors
140966466
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
140966466
TFTC complex
140966466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
140966466
NCBI-ProteinID:
XP_073282844
LinkDB
All DBs
Position
2:complement(7864197..7870103)
Genome browser
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQQATGIICAINGSFSGGKSQEIVVARGKVLDLLRPDDNGKLQSLLSVEIFGA
IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNTFDKIHQETFGKSGCRRIVPGQYV
AIDPKGRAVMIGACEKQKLVYVLNRDTVARLTISSPLEAHKSHTICYSICGVDCGFENPI
FAAIELDYSEADQDPTGQAASEAQKNLTFYELDLGLNHVSRKWSEQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRREDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDMFKVTLDHENDRVKELKIKYFDTIPVTSSLCVLKSGFLFAASEFGNHALYQFQAI
GDDPDVGASSATLMETEEGFQPVFFQPRKLKNLLRIDQIESLMPMMDMKVNNLFEEETPQ
IFSLCGRGPRSSLRVLRPGLAISEMAVSQLPGVPSAVWTVKKNVNDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGEIIYFEVDMTGQLMEVEKHEMSGDVACLDISPIPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSLHSVSSPPESLLFLEVQASTGGDDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSIIVRGRRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCAEGVVAVAGDALRIFTVERLGESFNETAIPLRYTP
RKFVVQPKRKLLVIIESDQGAFTAEEREAAKKESFESSGVGENGNIEQMENGDDEENSDP
LSDEQYGYPKAESGKWVSCIRVLDPRSALTTCLLELQNNEAAFSMCSVNFHDKEYGTLLA
VGTAKGLQFWPKRSFEAGYIHIYRLKEDGKVLELLHKTQVDGVPLALCQFQGRLLAGIGP
VLRLYDLGKRRLLRKCENKLFPNTITSIQTYRDRIYVGDMQESFHYCKYRRDENQLYVFA
DDTVPRWLTAAQHIDFDTVAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNGA
PNKVEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGGLGAFLPFTSRDDVDFFSHLE
MHMRQEHPPLCGRDHIAYRSSYFPVKDVIDGDLCEQFPTLPMDMQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgtacagcctaacccttcaacaagctacaggaataatctgtgccatcaatgga
agcttctctggagggaaatcacaagaaattgttgtggcgcgtgggaaagtactcgacctc
ctgcggcctgacgacaatggtaagctacagtctcttctatctgttgaaatttttggcgct
attcgctctttagctcagtttcgcctcactggagcgcaaaaagattacattgtcgttggc
tctgattctggtcgcatcgtaatccttgaatacaacaaagagaagaacacatttgataaa
atccatcaagaaacttttggaaagtctgggtgccgtagaattgtcccgggtcagtatgtg
gccattgaccctaaaggtagagctgtaatgattggtgcttgtgagaagcagaagcttgtt
tatgttttgaatagggacacagtagctagattgactatctcatcgcctcttgaggcacat
aagagccacactatttgttattccatttgtggggtggattgtgggtttgaaaacccaatt
tttgctgctatagaattggactattccgaggctgaccaggaccccacaggtcaagcggcc
agcgaagcgcagaagaatttgaccttttatgaattggatttgggtcttaaccatgtttcg
aggaaatggtctgaacaggttgataatggtgctaatatgcttgtcacagtgcctggtggt
ggggatgggccgagtggtgttcttgtgtgtgcagaaaattttgtcatatataagaatcaa
gggcatccagatgtccgagcagtgattccgaggcgtgaggacttaccggctgagcgtggg
gttttgattgtctcagctgctatgcataagcagaaatccatgtttttcttcctcttgcaa
acggagtatggggatatgtttaaagtgacattggaccatgagaatgatagagtgaaagag
ttgaagataaaatattttgatactattcctgtcacatcatctttgtgcgtcttgaagtca
gggtttctatttgctgcatcagagtttgggaaccatgccttgtatcagtttcaggcgata
ggagatgatccagatgtgggggcctcatcagctacactgatggaaacagaagaaggtttc
cagcctgtgtttttccagcctagaaaactgaagaatctacttaggatagaccaaattgag
agtctgatgccaatgatggatatgaaagtcaataatctatttgaggaagaaactcctcag
atattttcactttgtgggcggggtcctcgttcatcactccgtgtgttgagacctggtttg
gctattagtgaaatggcagtatcacagttacctggtgttccaagtgctgtctggactgtc
aaaaagaatgtcaacgatgaatttgatgcctatattgttgtttcttttgcaaatgccact
cttgtgctttccattggtgagactgttgaagaagtaagcgacagtgggtttcttgataca
acaccttctcttgctgtttctttgattggcgacgattctttgatgcaagtgcatcccagt
ggtattaggcatatcagggaagatgggcgtattaatgagtggagaactccaggaaagaga
acaattgttaaggttgggtctaacagacttcaggttgtcattgcactgagtggaggggaa
attatatattttgaagttgatatgactggtcagttgatggaggttgagaagcatgaaatg
tcaggtgatgttgcctgtttggatatttctcctatccctgagggaagacagagatcacgc
tttcttgctgttggatcttatgataacactattcgcattttgtctttggatcctgatgac
tgtatgcaaatactaagtctgcatagtgtttcatcacctccggaatctctcctatttctt
gaagttcaggcttctactggaggtgatgatggggctgaccaccctgcaagcctctttttg
aatgctggtctacaaaatggggttttattcaggacagtagtagatatggtgactggacag
ctatcagatgcccgatctcggttcttaggactcagagcaccaaagctgttttctattatt
gtgagaggacggagagctatgctttgcttgtcaagtagaccttggctaggttatatacac
caaggacatttccttctcacaccattgtcatatgagactctcgaatacgctgcttcattt
tcatcagatcagtgtgcggaaggtgttgttgctgttgctggggatgcattaaggattttt
actgttgaaagactaggagaatcttttaatgagacagctatacctttgaggtatactcct
aggaaatttgtagttcaacccaagaggaagctgttggtaataattgagagcgatcaggga
gcattcactgcagaagagcgtgaagctgcaaaaaaggagtcctttgagtcttccggagtg
ggggaaaatggaaacattgagcagatggagaatggtgatgatgaggaaaacagtgatccg
ctttctgatgagcagtatggttatccaaaagcggagtctggaaagtgggtttcttgcatt
agagttctggatcctaggtcagctttaacaacctgtctgctagagcttcagaataatgaa
gctgcgttcagcatgtgctctgtgaatttccacgataaggagtatggaacacttttggct
gttggaacagcaaaaggtcttcaattttggcccaaaagatcctttgaggctggatatatt
cacatatataggcttaaagaagatggaaaagtccttgagcttttgcacaagacacaagtg
gacggtgtacctcttgcattatgccaattccaaggaagattgcttgctgggattggtcct
gtgcttagattgtatgatttggggaaaagaaggttgcttagaaagtgtgagaataaattg
ttccccaacacaatcacttccatccaaacctatcgggatcgaatttatgtcggggacatg
caagagtcgtttcactactgcaagtacagacgtgatgaaaatcagttatatgtatttgct
gatgacactgttccaaggtggcttactgctgctcagcatatcgacttcgacactgtggct
ggtgcagacaaatttggaaatatctactttgtccgattgccacaggatgtgtcagatgag
attgaagaagaccccactggtggtaagataaagtgggagcaggggaagttgaatggagca
ccgaacaaagtagaggaaatagttcaatttcatgttggtgatgtggtcacttgcttgcag
aaagcatctctgattcctggaggtggagagtgcatcatctatgggactgtaatgggtggt
ttgggggcattccttccatttacttcacgtgatgatgttgacttcttctctcatcttgag
atgcacatgcggcaggagcacccacctttgtgtggcagagatcatattgcctacagatca
tcctattttcccgtgaaggatgttatagacggagatttgtgcgaacaatttccaaccttg
cccatggatatgcaacgtaaaattgccgatgagctggatagaactccgggggagatttta
aagaaactggaagaaataagaaataaaatcatctga
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integrated database retrieval system
