Primulina huaijiensis: 140967538
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Entry
140967538 CDS
T11038
Name
(RefSeq) probable pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140967538
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140967538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140967538
NCBI-ProteinID:
XP_073284222
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MVEMATRNSTERRKLGFFSCGTGNPIDDCWRCDPNWQKNRKRLADCGIGFGRNAIGGRDG
RFYIVTDSGHDDPVNPRPGTLRHAVIQNQPLWIVFKRDMVITLKQELIMNSFKTIDGRGV
NVHIANGACLTIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSS
HIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAY
NHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYLAPVNPFAKEV
TKRVETAESQWKGWNWRSEGDLMLNGAYFTPSGAGASASYARASSLGAKSSSMIGPITSG
AGVLNCRRGHQC
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaatggccactcgaaacagcacagagaggcgaaagcttggatttttctcatgt
ggaactggtaatcctattgatgactgctggcgttgcgaccccaactggcaaaaaaaccgc
aagagactagccgactgtgggattggttttgggcgcaatgccattggcggccgtgatggc
agattctacattgtcaccgattctggacatgacgatccagttaaccccaggcctggcacc
ctacgccatgctgtcatccaaaatcagcctctctggattgtgttcaaacgtgacatggtc
ataacattgaagcaagaactcatcatgaacagcttcaagaccattgatggccgtggcgtc
aacgtccacatcgctaacggggcctgcctcacaatccaattcgtgaccaatgtcataatc
catggccttcatatccatgactgcaaaccaacgggaaatgccatggtgagaagctcacct
tctcattatggttggaggactatggctgatggagatgccatttcaatctttggttcgagt
catatctgggtcgatcacaactcgctctctaactgtgctgatggccttgtggatgctgtc
atggggtctactgctattaccatttctaacaactatttcacccatcacaacgaggttatg
ctgttgggtcatagtgattcttatgttagagacaaacaaatgcaagtgactattgcctat
aatcactttggagaaggcctcattcaaagaatgcctaggtgcagacacggatatttccac
gtcgtgaacaatgactatactcattgggagatgtatgctatcggtggaagtgctaaccca
acaatcaacagccagggcaacagatatcttgcgccagttaatccttttgccaaagaggtg
actaagagggttgaaacagcagaaagccaatggaagggttggaactggagatcagaaggc
gacctcatgttaaatggagcttattttactccatctggagctggagcttcagctagctac
gctagagcttcaagcttgggtgctaagtcttcctccatgattggaccgattacttctggt
gcaggtgtccttaactgtcgccgcggccaccagtgctaa
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