Primulina huaijiensis: 140968652
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Entry
140968652 CDS
T11038
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phua03009
]
140968652
Ribosome biogenesis [BR:
phua03009
]
Eukaryotic type
90S particles
Other 90S particles
140968652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
OB_PDCD11
Spt6_S1
Suf
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
PRP6_TPR
UTP6_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
140968652
NCBI-ProteinID:
XP_073285780
LinkDB
All DBs
Position
2:20675020..20698017
Genome browser
AA seq
1918 aa
AA seq
DB search
MAPPSRKSHSKNLRNPSSKAAISKVNRRSRTVSSQKLPIQLEDEAPDFPRGGGRSFRNEK
KDVVGAILDNEIEADHRLLQKRRKGKKVQKRNQSGEDDIGSLFGDGIMGKLPRFSNRITL
KNVSSGMKLWGVIAEVNEKDIVVSLPGGLRGLVRACEAFDPILGGEVEQDAENNVLSSIY
VGQLVSCIVLQVDDDKKEIANRKIWLSLRLSLLHKGLTLDVIQEGMVLSAYVKSIEDHGF
ILHFGCPYFAGFMSKHSKSEKGSGEARVGHILQGVVRSIDRARKVVHMDSDSDAISKCVT
KELKGVSLDLLIPGMMVNARVQSTLENGIMLSFLAYFTGTVDVFNLDKTFPSSKWKDGYS
KNMKINARILFIDPSTRAVGLTLNPYLVGNKAPPSLVKVGDIFDHSKVIRVDKGSGLLLE
TPTLPVPTPIYVNVTDVADKQVKNLEKSFKEGSFVRVRVLGFRRLEGLATGILKTSAFEG
SVFTHSDVKPGMVVRAKIIIVDSFGAIVQFSSGVKALCPLRHMSEFEILKPRKKFQVGVE
LVFRVLGCKSKRITVTHKKTLVKSKLEILSSYADATDGLVTHGWITKIENHGCFVRFYNG
VQGFAPRYELGLNPESDIGSMYHVEQVVKCRVVKCIPASRRIHLSLNMTLKRAVGVGSVK
PGSLVAGVVEQVSPHEILVDVISSGHMKGTISLEHLADHHGLATLMMSALKPGYQFDQLL
VLDIEGNSLVLTAKYSLINSAHELPVDTTQIRCHSTVPGYVCNIIESGCFVRFIGRLTGF
APKSKATDHWRADLSEVFFVGQSVRSNIVDVDSETGRITLSLKQSLCCSTDSSFIQEHFL
LEEKIAKVQLLDSEGPELSWISAFDIGTIIEGKVHETKDFGVIISFEKYNDVYGFISHYQ
LAGTTVENNSTIRALIIDVSKIERLVDLTLKPEFLDTPKEESSIMKIGKKRKIREYKKLE
LNQIVNALVEVVKETYLVLSIPSHNFAIGYASITDYNIQKLPPKQYTNGQSVIATVVALP
NPTTCGRLLLLLKSLGDGMESSSSKRSKNKSRHDVGSLVQVEITEIKPLELRLKFGSVFH
GRIHVTEAADDNSSENPFSEYRIGQTLSARIVSKRSMPYSSKGRYSWELSIKPSILKGSS
DINGLIPAEDFNYSYGQNVSGYVYKIDNQWAWLTISRKVKAHLYVLDSSCEPSELADFQK
RFLVGKALSCYIISVNEEKKLLRVVLHPLAVGFGELKKNDPYCHPQFHIFEGTYVGGRIS
KVLPGVGGLLVQIDQHFYGKVHFTELTDAWVSDPLSGYREGQFVKCKVLEINRAGNGKIH
IDLSMRSTSNDRHDLKLTEHNSDMHSSTRHVDKLTDLYPNMVVQGYVKNISAKGCFVMLS
RKIDAKVLLSNLSVNFVDNPEKDFPVGKHVSGRVLSVEPLSNRVELTLKTPTATSGPKFD
AYSLNSIIVGDIISGRIKRVESYGLFISIDRTNVVGLCHVSELSDIHLDNIETEFNAGER
VITKVLKVDEERNRVSLGMKKSYFKDEETLQMISRQSVDDDVEKNGFMVVAESKSLLQNT
SAAIENANLEVDSGYQSVLADFENRALVPPLEVPLDDIEIPDDEVDVDNVPNAAHSEIVE
EENKKRAKKKAREEREQEIRAAEDRLLEKDIPKSADECEKLVRSSPNSSFIWIKYMEFML
SLADVEKARSIAERALRTINIREELEKLNIWVAYFNLENEYGNPPEDAVMKVFQRALQYC
DPKKVHLALLGMYQRTEQHKSACELLDKMARKFKRSCKVWLCHIQSLLKQNSDGIQSVVN
RALLCLPRHKHIKFISQTAILEFKSGVPERGRSLFEGMLREYPKRTDLWSIYLDQEIRLG
DGDVVRALFERAISLCLPPKKMKFLFKKYLAYEKTIGDEERIESVRKKALDYAESTLT
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggcacctccttcaagaaaatctcactcgaaaaacctccggaatccatccagcaaagct
gcgatatccaaagtaaaccgccgtagccgcactgtttcgtcgcaaaagttacctattcag
ctcgaagacgaggccccagatttcccccgaggtgggggaagatctttcagaaatgaaaag
aaagacgtggttggagcaattttggacaatgagattgaggccgatcacagattattgcag
aaaagaaggaagggaaagaaggtgcaaaaaaggaatcaatccggggaggatgatataggt
tcactatttggagatggaattatgggtaaattgcctagattttccaataggatcacttta
aagaacgtctcttccggaatgaaattgtggggtgtgattgctgaagtgaacgagaaagat
attgtagttagtctcccagggggtttacgggggctagttcgtgcatgtgaggcctttgac
ccaatattgggtggtgaagtggaacaggacgcagaaaataatgtcctttctagcatatat
gttgggcagcttgtatcttgcattgtcctacaagtagatgatgataaaaaggagatagca
aatcgaaagatctggctttctcttcgtctatctttgttgcacaaaggcttaaccctggat
gtcatccaagaaggaatggtgctgagtgcatatgtgaagagcatcgaagatcatgggttt
atactccattttggatgtccttattttgcaggatttatgtcaaaacacagcaaatctgaa
aaaggaagtggtgaagcaagagtgggacatattttacaaggggttgttagaagtattgat
agagctcgtaaggtagtccatatggattctgactctgacgccatttcaaaatgtgtgacc
aaggagcttaagggtgtttcattagatcttctcattccaggcatgatggttaatgctcgt
gtgcaatcaacccttgaaaatggaatcatgttatctttccttgcctattttactggaact
gttgatgtgttcaatttggataaaacttttccttcttcaaaatggaaggatggctattct
aaaaatatgaagatcaatgctcggatactatttattgatccttcaactagggctgttggt
ttaacacttaatccttacttagtcggcaacaaagccccaccatctctcgttaaagtcggc
gatatcttcgatcattctaaagtaatcagggttgataaggggtcaggtcttcttctggaa
actcctacactaccagttcctacccctatatatgtgaatgtaaccgatgtcgcggacaaa
caagttaaaaatttggagaagagttttaaagaaggaagctttgttcgtgtcagggtactt
ggatttaggcgcttagaggggcttgcgacgggtattttgaagactagtgcatttgaaggt
tcagttttcactcactctgatgtaaagcccggaatggtggtaagagctaaaatcatcata
gttgacagttttggtgctattgtccaattttccagtggcgtcaaagccctatgtcctctc
cggcatatgtcagagttcgaaatactgaagcctaggaaaaaatttcaggttggagttgag
ttagtttttcgtgttcttggttgcaagtccaagcggataactgttacacacaagaaaact
cttgtgaagtcaaaactagaaattcttagttcttatgctgatgcaaccgatggattagtc
acacatgggtggattacaaagattgagaaccatgggtgctttgttaggttttacaatggg
gttcaaggatttgccccaagatatgaacttggtttgaatccagagagtgatataggttcc
atgtatcatgttgagcaagttgtcaaatgcagagttgtgaaatgtattcctgcatctcgc
cgaatacatctcagtttgaacatgacgcttaaaagggcagtaggggttgggagtgtgaaa
ccaggcagcttagttgctggagttgttgagcaggtatcaccacatgagattctagtagac
gtcatttcctcaggtcacatgaaaggcacaatttccctcgagcatttggctgatcaccat
ggccttgccactttgatgatgtctgccttgaagccaggttatcagtttgaccaactgttg
gttctcgatattgaaggaaacagtcttgtactcactgccaagtattcactaattaactca
gctcatgagcttcctgttgatactacccaaattcgttgtcattctacggtgcctggttat
gtgtgtaatataattgaaagtggttgcttcgttcgatttataggacgtttaactggtttt
gctcccaaaagcaaggctactgatcattggagagcagatctgtctgaggtcttttttgtt
ggtcaatctgttcgtagcaacatagttgatgttgatagtgagacgggtagaataaccctt
tcactgaagcagtcattgtgctgttctacagattcatcttttatacaggaacactttctt
ttggaagagaagattgcgaaggtgcaactcttggattctgaaggccctgagttgagctgg
atttctgcgtttgatattggcaccattattgaaggaaaagttcatgaaactaaggatttt
ggtgttataatcagctttgagaaatacaatgacgtatatggtttcatttcacattatcag
ttggctggaaccactgtggaaaacaactctactattcgagctttgattatcgatgtttct
aagatagaacgcctggtggatctaactttaaagccagagtttcttgatacaccaaaagaa
gagagctccatcatgaaaattggaaagaaacgcaaaataagagaatataaaaagttggaa
ctgaatcaaattgtaaatgctttggtcgaagttgtgaaggaaacttacttggttctctca
attccatctcataattttgccattggctatgcatcaataactgattataacatccagaaa
ttgccacctaaacaatataccaatggacaaagtgtcatcgccactgtagtggctcttcca
aatcctacaacatgtgggagattgttactcctgcttaaatctttaggcgatgggatggag
tcttccagttctaagcgatctaagaacaagtctagacatgatgttggttctcttgtacag
gtggagattactgaaataaagcctcttgaactcagactgaaatttggttctgtatttcat
ggaagaatacatgtgacagaggcagctgatgataattctagtgaaaatccatttagtgaa
taccgaattggccaaacactgtcagcaaggattgtatcaaagcgtagtatgccatacagt
agtaaaggaagatattcatgggagttatccataaagccttccattctaaaaggatccagt
gacatcaatggtttaattcctgctgaagattttaactattcatatggacaaaatgtttct
ggttatgtgtataaaattgacaatcagtgggcttggctgactatatcgcgaaaggtgaag
gctcacttgtatgttcttgacagttcatgtgagccttctgaacttgcggacttccagaag
aggtttctcgtgggcaaagcactgtcttgttatattattagtgtaaatgaggagaagaaa
ttactacgtgtggttttacacccattggctgttggttttggggaacttaaaaagaatgat
ccttattgtcatccacagttccatatatttgaaggtacctatgtgggtggcaggatttct
aaagttcttcctggtgttggtggattgcttgtccaaattgatcagcacttctacggtaag
gttcattttactgaactgacagatgcatgggtctctgacccactttctggttatcgcgaa
gggcagtttgtcaaatgcaaagttctggaaataaatcgtgctggaaatgggaaaatccac
attgatttgtctatgagatcaacttccaatgatagacatgatctgaagctcactgaacat
aatagtgacatgcattcatctactcggcacgtggacaaattaaccgacctctatcctaat
atggtggttcagggttatgttaaaaatatctccgcaaaaggatgctttgtgatgctctca
cggaagatagatgcaaaagttctcctttctaatttgtcagtaaattttgttgataatcca
gaaaaagatttccctgttggaaaacacgtgagtggccgggtgctttctgtggagccgttg
tctaaccgtgttgaattaactctcaagactccaactgcaaccagtgggccaaagtttgat
gcttattctttaaatagcattatagttggagacataatttctgggagaatcaagcgcgtt
gaatcttatggattgtttatatctatcgatcgaacaaatgtggttgggctatgccatgtt
tcggagctttcagatattcatttggacaatatagagacagaatttaatgcaggggaaaga
gtgatcacaaaagttttgaaggtggatgaagagagaaatcgagtttctcttgggatgaag
aaatcatacttcaaagatgaggaaacattgcaaatgatttcaagacaaagcgttgatgat
gacgttgagaaaaatggctttatggtggtagcggaatcaaaatcattgctacaaaacact
tctgctgcaattgagaatgctaatcttgaagttgacagtggatatcagtcggtgctagct
gattttgaaaatagggctcttgttccaccacttgaggttcctcttgatgatatagaaata
ccagatgatgaagttgatgttgataatgtaccaaatgctgctcattcagaaatcgttgaa
gaggaaaataagaagagggcaaaaaagaaagctagagaggagagggaacaagaaataagg
gctgctgaagacagattgctggaaaaagacattccaaagagtgccgatgaatgtgagaaa
cttgttcgaagctcgcctaacagtagctttatatggataaaatatatggaatttatgctc
tctttggcagatgttgagaaggcacgatccatcgctgagagggctctgagaacaattaat
attcgagaagaattagagaaactgaatatctgggttgcttacttcaacctggagaacgag
tacggaaatcctcctgaggatgctgttatgaaagtatttcagagagcattgcagtactgt
gatcccaaaaaggtgcatcttgcactcctaggaatgtaccaaagaacagaacaacacaaa
tcagcttgcgagcttcttgacaaaatggctaggaagttcaagcgttcatgcaaggtctgg
ctgtgtcacattcaatctcttttgaaacaaaactctgacgggattcagtctgttgtaaat
cgtgctcttctgtgccttcctcgacacaagcatataaaatttatttcacagactgcgatt
ctcgagtttaaaagtggcgttccagagagagggagatccctgtttgaggggatgcttaga
gagtatcctaagagaacagatttgtggagcatttatcttgatcaggagatccggctcggt
gatggggatgtagttcgtgctttatttgagagagcaataagtttgtgccttcccccgaag
aagatgaagttcttatttaagaagtatcttgcgtatgagaagaccataggtgatgaagaa
agaatcgagtccgtgaggaagaaggcgctggattatgctgagagtactcttacttga
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