KEGG   Primulina huaijiensis: 140969237
Entry
140969237         CDS       T11038                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
phua  Primulina huaijiensis
Pathway
phua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    140969237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140969237
   03009 Ribosome biogenesis [BR:phua03009]
    140969237
   04131 Membrane trafficking [BR:phua04131]
    140969237
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phua04147]
    140969237
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     140969237
Ribosome biogenesis [BR:phua03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    140969237
Membrane trafficking [BR:phua04131]
 SNARE
  SNARE associated proteins
   Others
    140969237
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    140969237
Exosome [BR:phua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   140969237
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_33 AAA_5 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase AAA_17 nSTAND3 AAA_28 Mg_chelatase ATPase_2 AAA_18 Viral_helicase1 Parvo_NS1 IstB_IS21 ABC_tran AAA_7 NACHT AAA_24 NB-ARC TsaE DUF815 Vps4_C ResIII AAA_lid_PRS2_C Zeta_toxin Sigma54_activ_2 KAP_NTPase Zot Phage_Mu_Gp48
Other DBs
NCBI-GeneID: 140969237
NCBI-ProteinID: XP_073286631
LinkDB
Position
Unknown
AA seq 806 aa
MSNQPESSDSKSGKKDFSTAILERKKAANRLIVDEAVNDDNSVVALHPATMEKLQIFRGD
TILIKGKKRKDTICIALADDACEEPKIRMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVH
VLPLDDTVEGLTGDLFETYLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMGQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APAIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFHSALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSAGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKAKEN
PDSMDEDVVDEVSEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGVGATSGSDPFTASAGGVEEDDLYN
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgagtaatcaacccgagtcatccgattcaaaaagtgggaagaaggacttctcaacggcg
atcttggagaggaagaaggcagcgaatcggctaatcgttgacgaggcggtcaatgacgac
aactcagttgtggccctccaccccgccaccatggaaaagctccagatttttcgtggggat
actattttgattaagggtaagaaaaggaaggatacaatctgcattgcccttgctgatgat
gcatgtgaagagccaaagataaggatgaacaaggtcgtacgcacaaacttgagggtccgg
cttggagatgttgtgtctgtacaccaatgccctgacgttaaatatggaaagcgtgttcat
gtactacccttggatgatacggtagagggcctcactggagatctgtttgaaacataccta
aaaccttattttctggaagcgtatcgccctgttagaaaaggcgatcattttcttgtgcga
ggggggatgagaagtgtggaatttaaagtaattgagactgatccaggtgagtattgtgtt
gttgcccccgatactgagatcttttgcgaaggagagccggtgaaacgagaggatgaagat
aggctggatgaggttggttatgatgatgtaggtggtgttaggaagcagatgggtcagatt
cgtgaattggtagagttgcctctgaggcatccccagcttttcaaatctattggtgtgaaa
ccacccaagggaattttactttatggacccccaggttctggaaagacgttaattgctagg
gctgttgccaatgaaaccggtgctttcttctttttaattaatggaccagaaattatgtcc
aaattggctggagagagtgaaagcaatctgagaaaggcatttgaggaggcagagaaaaat
gccccggctattattttcattgatgaaattgattcaatagcacctaagcgtgagaaaaca
aatggtgaagttgaaagaaggattgtttctcagctcttgactcttatggatgggctgaaa
tcacggtcccatgttattgtcatgggagcgactaatcggccaaacagcattgacccagct
ctcagaagatttggtaggtttgacagggaaatagacattggtgttccagatgaagttggt
cgacttgaagttctcaggattcataccaagaacatgaagctttctgatgatgttgacctg
gagagaattgcaaaagacactcacggctatgttggcgctgaccttgcagctctatgtact
gaagctgcacttcagtgcatcagagagaaaatggatgtcattgatctggaggatgataca
attgatgctgaaatactcaactccatggctgtaacaaacgagcacttccattctgctctt
ggaactagcaatccttctgctctaagggaaacagtcgttgaggtgcccaatgtgtcctgg
gaagatataggaggcctagaaaatgtcaagagggagcttcaggagactgttcaatatcct
gttgagcatccagagaagtttgagaaatttggcatgtcaccatctaagggtgttcttttc
tatgggcctcctggatgcggcaaaactctattggcaaaggcaattgcaaatgaatgtcaa
gccaatttcatcagtgtaaaagggcctgaattgctgaccatgtggttcggagagagtgaa
gctaatgttcgtgaaatatttgacaaagctagacaatcagctccatgtgtccttttcttt
gatgagcttgattctatagccactcagcgaggaagtagtgctggtgatgctggaggtgca
gctgatagagtcctcaaccaacttctaacagagatggatggcatgaatgccaaaaaaact
gtttttataattggggctactaacagacctgacataattgatccagcactcttacgtcct
gggcgtctcgatcagttaatatatatccctctgccagatgaggattcacgccatcaaatc
ttcaaagcctgcctccgcaaatcaccactttccaaagatgttgatttgcgagctcttgcc
aagtatactcaaggatttagtggtgcagatatcacggaaatatgtcagcgggcatgcaag
tatgccattagagagaacattgagaaagacatagaaagggagaggaaggcaaaagagaat
cccgattccatggatgaggatgttgttgatgaagtttcagaaatcaagcccgcacatttc
gaggagtccatgaaatatgctcgtagaagtgtgagtgacgctgatattcgtaagtaccaa
gcatttgcgcagacgttgcagcagtctcgaggatttggaacagagttccgcttcgctgaa
tctggagtcggtgcgacatctggatctgacccatttacagcctcagctggcggagtcgag
gaagatgacttgtataattag

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