Primulina huaijiensis: 140969237
Help
Entry
140969237 CDS
T11038
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
phua Primulina huaijiensis
Pathway
phua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140969237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140969237
03009 Ribosome biogenesis [BR:
phua03009
]
140969237
04131 Membrane trafficking [BR:
phua04131
]
140969237
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phua04147
]
140969237
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140969237
Ribosome biogenesis [BR:
phua03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
140969237
Membrane trafficking [BR:
phua04131
]
SNARE
SNARE associated proteins
Others
140969237
Autophagy
Aggrephagy
Other aggrephagy associated proteins
140969237
Exosome [BR:
phua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140969237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Viral_helicase1
Parvo_NS1
IstB_IS21
ABC_tran
AAA_7
NACHT
AAA_24
NB-ARC
TsaE
DUF815
Vps4_C
ResIII
AAA_lid_PRS2_C
Zeta_toxin
Sigma54_activ_2
KAP_NTPase
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
140969237
NCBI-ProteinID:
XP_073286631
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSNQPESSDSKSGKKDFSTAILERKKAANRLIVDEAVNDDNSVVALHPATMEKLQIFRGD
TILIKGKKRKDTICIALADDACEEPKIRMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVH
VLPLDDTVEGLTGDLFETYLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMGQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APAIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRSHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFHSALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSAGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKAKEN
PDSMDEDVVDEVSEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGVGATSGSDPFTASAGGVEEDDLYN
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcaacccgagtcatccgattcaaaaagtgggaagaaggacttctcaacggcg
atcttggagaggaagaaggcagcgaatcggctaatcgttgacgaggcggtcaatgacgac
aactcagttgtggccctccaccccgccaccatggaaaagctccagatttttcgtggggat
actattttgattaagggtaagaaaaggaaggatacaatctgcattgcccttgctgatgat
gcatgtgaagagccaaagataaggatgaacaaggtcgtacgcacaaacttgagggtccgg
cttggagatgttgtgtctgtacaccaatgccctgacgttaaatatggaaagcgtgttcat
gtactacccttggatgatacggtagagggcctcactggagatctgtttgaaacataccta
aaaccttattttctggaagcgtatcgccctgttagaaaaggcgatcattttcttgtgcga
ggggggatgagaagtgtggaatttaaagtaattgagactgatccaggtgagtattgtgtt
gttgcccccgatactgagatcttttgcgaaggagagccggtgaaacgagaggatgaagat
aggctggatgaggttggttatgatgatgtaggtggtgttaggaagcagatgggtcagatt
cgtgaattggtagagttgcctctgaggcatccccagcttttcaaatctattggtgtgaaa
ccacccaagggaattttactttatggacccccaggttctggaaagacgttaattgctagg
gctgttgccaatgaaaccggtgctttcttctttttaattaatggaccagaaattatgtcc
aaattggctggagagagtgaaagcaatctgagaaaggcatttgaggaggcagagaaaaat
gccccggctattattttcattgatgaaattgattcaatagcacctaagcgtgagaaaaca
aatggtgaagttgaaagaaggattgtttctcagctcttgactcttatggatgggctgaaa
tcacggtcccatgttattgtcatgggagcgactaatcggccaaacagcattgacccagct
ctcagaagatttggtaggtttgacagggaaatagacattggtgttccagatgaagttggt
cgacttgaagttctcaggattcataccaagaacatgaagctttctgatgatgttgacctg
gagagaattgcaaaagacactcacggctatgttggcgctgaccttgcagctctatgtact
gaagctgcacttcagtgcatcagagagaaaatggatgtcattgatctggaggatgataca
attgatgctgaaatactcaactccatggctgtaacaaacgagcacttccattctgctctt
ggaactagcaatccttctgctctaagggaaacagtcgttgaggtgcccaatgtgtcctgg
gaagatataggaggcctagaaaatgtcaagagggagcttcaggagactgttcaatatcct
gttgagcatccagagaagtttgagaaatttggcatgtcaccatctaagggtgttcttttc
tatgggcctcctggatgcggcaaaactctattggcaaaggcaattgcaaatgaatgtcaa
gccaatttcatcagtgtaaaagggcctgaattgctgaccatgtggttcggagagagtgaa
gctaatgttcgtgaaatatttgacaaagctagacaatcagctccatgtgtccttttcttt
gatgagcttgattctatagccactcagcgaggaagtagtgctggtgatgctggaggtgca
gctgatagagtcctcaaccaacttctaacagagatggatggcatgaatgccaaaaaaact
gtttttataattggggctactaacagacctgacataattgatccagcactcttacgtcct
gggcgtctcgatcagttaatatatatccctctgccagatgaggattcacgccatcaaatc
ttcaaagcctgcctccgcaaatcaccactttccaaagatgttgatttgcgagctcttgcc
aagtatactcaaggatttagtggtgcagatatcacggaaatatgtcagcgggcatgcaag
tatgccattagagagaacattgagaaagacatagaaagggagaggaaggcaaaagagaat
cccgattccatggatgaggatgttgttgatgaagtttcagaaatcaagcccgcacatttc
gaggagtccatgaaatatgctcgtagaagtgtgagtgacgctgatattcgtaagtaccaa
gcatttgcgcagacgttgcagcagtctcgaggatttggaacagagttccgcttcgctgaa
tctggagtcggtgcgacatctggatctgacccatttacagcctcagctggcggagtcgag
gaagatgacttgtataattag
DBGET
integrated database retrieval system