Primulina huaijiensis: 140969245 Help Entry 140969245         CDS       T11038                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism phua  Primulina huaijiensis Pathway phua03030   DNA replication phua03410   Base excision repair phua03420   Nucleotide excision repair phua03430   Mismatch repair Brite KEGG Orthology (KO) [BR:phua00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     140969245    03410 Base excision repair     140969245    03420 Nucleotide excision repair     140969245    03430 Mismatch repair     140969245  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:phua03032]     140969245    03400 DNA repair and recombination proteins [BR:phua03400]     140969245 Enzymes [BR:phua01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      140969245     6.5.1.6  DNA ligase (ATP or NAD+)      140969245     6.5.1.7  DNA ligase (ATP, ADP or GTP)      140969245 DNA replication proteins [BR:phua03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     140969245  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      140969245 DNA repair and recombination proteins [BR:phua03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      140969245    NER (nucleotide excision repair)     Other NER factors      140969245    MMR (mismatch excision repair)     Other MMR factors      140969245 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  140969245 NCBI-ProteinID:  XP_073286640 LinkDB All DBs Position Unknown AA seq 823 aa AA seqDB search MTLLLNQYLNLSTKLLPIKLFISFSSKASFLFARSNPRFKAMSTSRPSAFDVLMSNSSKK KQSQQQKPQQSSPRKRKNPADISKTSSLNPNVSDSGSPVAKPIESANLGQTGNALVETLS KDGEQAAIGPTIAEDTRASGSSKQENIKSKELNSKQGGLGTADSDKDSVVVKKPRMSITP DESVVELKKKAAKFNVNGAAYWAVGERVPFMFVVKAFDAISKESGRIAITEIVCNMLRTV IETTPDDLVAVVYLLANRIASAHEGLELGIGDASIIKALAEACGGKEAHVKKQYKELGDL GLVAKASRSSQSLMRKPEALTVAKVFDTFRLIAKESGKDSQDKKKSHIKALLVAATDCEP QYLIRLLQTKLRIGLAEQTLLTALGHASVYSVKHSSPHAKVENPLEEAAKIVKQVYSVIP VYDKIVPALLSAGVWNLTKTCSFSPGIPVGPMLAKPTKGVSEIVEKFQEMEFTCEYKYDG ERAQIHYMDDGSVEIYSRNAERNTGKFPDVVAAVTRLKTPSVTSFVLDCELVAYDREKKK IQPFQILSTRARKNVALSEIKVNVCIYAFDILYLNGQQLLQEQLNVRRENLYKSFQEEVG FFQFATALTSNDLEEIQKFLEDAVSSSSEGLIIKTLNRDATYEPSKRSNNWLKLKKDYME SIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDNDKEEFQSICKIGTGFSEAVLEERSAS LRSKVIPKPKSYYRYSDSLSPDVWFEPTEVWEVKAADLTISPVHRAAIGIVNPEKGISLR FPRLLRVREDKNPEQASSSDMVADMYNAQKHNQRDNQDDKEDD NT seq 2472 nt NT seq  +upstreamnt  +downstreamnt atgactctgctgctcaatcagtatctcaatctctccacgaaactactcccgatcaaactg ttcatatcattctcttcgaaggcttcgttcctctttgcgaggtcaaaccctagattcaag gcgatgtccacctctcgcccctctgcattcgatgtcctcatgtccaattcttccaagaaa aagcagtcacagcagcagaagccgcagcaatcctctcccagaaagcgcaaaaaccccgct gacatttcaaaaacttctagtttgaaccctaatgtcagtgattcaggtagtcccgttgct aaaccgattgaaagtgcaaatttaggccaaactggaaatgcccttgtggagactttgtca aaagatggcgaacaagctgcaattggtccaaccatagctgaagatacccgtgcatcgggg agttcaaaacaggagaatattaaaagtaaagaattaaattccaaacagggtgggttggga actgctgattcggataaagattcagtggtggtgaagaagcccagaatgtctattactcct gacgagagcgtagtggagttgaagaaaaaagctgcgaagttcaatgtgaatggtgcagca tattgggctgtgggagagcgggtgccttttatgttcgtagttaaggcttttgatgctata tcaaaggaatccgggagaattgctattactgagatcgtgtgcaatatgcttaggactgtg atcgagaccacaccggatgatttagtggctgtggtgtacctcttggcaaataggattgct tccgcgcatgaggggttggaactaggaattggggacgcttcaattatcaaggcccttgca gaggcttgtgggggtaaagaagcacatgttaagaagcagtacaaggagcttggagatctg ggtcttgtggctaaagccagtcgatcatcacaatctttgatgcgcaaaccagaagcatta actgttgccaaagtttttgatacttttcggcttattgccaaggaatctggcaaggacagt caagataagaaaaagagtcacataaaagcgctactagtcgcagccactgattgtgaacct cagtatttgattcgtttactccagacaaagctgcgtattgggctggcggaacaaacgctt ttgaccgcacttggacatgcttcagtttattctgtgaagcactcatcacctcatgcaaag gttgagaatcctctagaagaggctgcaaaaattgtcaaacaagtttattctgtaattcct gtgtatgataaaatagtcccagctcttctttctgcgggggtatggaatctcacaaagaca tgtagcttttctcctggtattccagttggacccatgttagctaaaccaacaaaaggagta tctgaaattgtggaaaagtttcaagaaatggagtttacctgtgagtacaagtacgatgga gaacgtgcacagatacattacatggatgatggttcagttgagatatacagtagaaacgca gaaagaaatactggaaagtttccggatgttgttgctgcagtcactagattaaaaacacct tcagtgacatcatttgtactcgattgtgaactagttgcatacgaccgagagaagaagaaa atccagcctttccagattctcagtacgcgtgctcggaaaaatgttgcgttgagtgaaata aaagtcaatgtgtgcatatatgcctttgatattctctatcttaacggccaacaacttcta caggagcaacttaatgttcgtagagagaatctttacaagtcatttcaggaggaagttgga ttttttcagtttgctactgcactaacatcaaatgatctcgaggaaatacaaaaatttctt gaagatgctgttagttctagctctgaggggttgattatcaaaaccttgaatagagatgca acatatgagccttcaaaacggtctaataactggttaaaattgaaaaaagactacatggag agtattggtgattctttggatctggttcccattgctgcattccatggaaggggaaaacgt actggtgtgtatggcgcctttctccttgcttgttacgataatgacaaagaggagtttcaa agcatttgcaaaatcggcaccggcttttccgaagcagtgcttgaggaacgttctgccagt cttcgatctaaagttattcccaagccaaagtcatattacaggtattcagattcgttaagt ccagatgtgtggttcgaaccaactgaggtttgggaggtgaaagctgcagatctaactatc agccctgttcatcgtgctgccattggtattgtaaatcctgagaagggaatttctctacga tttccacggttgctgcgtgttcgagaagataagaatccagagcaggcatcttcatctgat atggttgctgatatgtataatgctcagaaacacaatcagcgagataatcaagatgacaaa gaggatgattga

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