KEGG   Primulina huaijiensis: 140969252
Entry
140969252         CDS       T11038                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
phua  Primulina huaijiensis
Pathway
phua03082  ATP-dependent chromatin remodeling
phua03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140969252
   03083 Polycomb repressive complex
    140969252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phua03036]
    140969252
Enzymes [BR:phua01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     140969252
Chromosome and associated proteins [BR:phua03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     140969252
   HDAC complexes
    Sin3A-HDAC complex
     140969252
    BRAF-HDAC complex
     140969252
    REST complex
     140969252
    SHIP complex
     140969252
    MiDAC complex
     140969252
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     140969252
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140969252
  Chromatin remodeling factors
   NuRD complex
    140969252
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 140969252
NCBI-ProteinID: XP_073286652
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYELHKKMEIYRPHKGYPVEL
AQFHSPDYVEFLQRITPDTQNLFLNEMTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNKLCDVAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEREGKFYAINVPLKDGIDDGSFLRLFKT
VITKVTDCYVPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGVLLGVELPNEIPENDYIKYFAPDYSLKSPSGHMENMNTKSYLNSIR
QQVCENLSSIQHAPGVQMHEVPPDFYIPDIDEDAQNPDKRIHRQTRDKQIQRDDEYYEGD
NDNDQIMDDA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgcagcaaggacagaatctcctatttctatgacggggatgtgggcaacgtgtacttt
gggccgaatcaccctatgaagccgcaccggttatgtatgactcaccatttggttctcgct
tatgagctccataagaagatggaaatttataggcctcacaaaggatacccagtagagcta
gctcagtttcattctcctgattatgtggagtttctgcagcgaatcactccggacactcaa
aatttgttcttgaatgaaatgacaaaatataatcttggagaagattgtccagtctttgac
aacctttttgagttttgccaaatttatgctggtggaactatagatgctgcccgaagatta
aataataagctctgtgacgttgccataaattgggctggtggcttgcaccatgccaaaaag
tgtgaggcatctggattttgttacatcaatgacttggttttgggaattttggagctgttg
aagtatcatgcccgcgtgctgtatattgatattgatgtgcatcatggtgacggggttgaa
gaagccttttattttactgacagggtaatgaccgttagttttcacaaatacggagatttg
ttctttcctggaacaggtgatgttaaggatgtaggggagagagaaggcaaattttatgct
ataaatgtccctctcaaggatggaatagatgatggcagctttttacgtctcttcaagacg
gttataacgaaggttacggactgctatgttcctggagcaattgttcttcaatgtggagca
gattcacttgctggggatcgattgggctgcttcaacctttcgattgatggccatgccgct
tgtgttaagtttgtgaagcagcttaatttgcctttgctggtaactggaggtggaggatac
actaaagagaatgttgctagatgttggacagtggagactggagttcttctaggcgtggag
ctccctaatgagatcccagaaaatgattatatcaaatattttgcaccagattactcattg
aaatctccaagtgggcacatggagaatatgaatactaaatcgtatctcaactcaatcaga
cagcaagtttgtgaaaatcttagctctatccaacacgcacctggtgtacaaatgcatgag
gtgccgcctgatttttacatccctgatatcgatgaagatgcgcagaatcccgacaaacgt
attcaccgacaaacacgagacaagcaaatccagcgagacgatgaatattatgaaggcgac
aatgacaatgatcagataatggatgatgcgtga

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