KEGG   Primulina huaijiensis: 140969328
Entry
140969328         CDS       T11038                                 
Name
(RefSeq) protein TRANSPARENT TESTA GLABRA 1-like
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
phua  Primulina huaijiensis
Pathway
phua03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    140969328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phua04121]
    140969328
   03036 Chromosome and associated proteins [BR:phua03036]
    140969328
Ubiquitin system [BR:phua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     140969328
Chromosome and associated proteins [BR:phua03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     140969328
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Gbeta Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_Aladin EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 MIOS_WD40 Beta-prop_WDR19_1st BBE WD40_RFWD3
Other DBs
NCBI-GeneID: 140969328
NCBI-ProteinID: XP_073286743
LinkDB
Position
Unknown
AA seq 331 aa
MDKSSSQLNSENVVTFDSPNPIYAMAISAANPTTIAIGSYLEELNNRVELLSFSLDSHSL
QLLPGLSFDHPYPPTKLLFHPSSAPPTNLLASSGDYLRLWEVKDASIDPVNVFNNSKSSE
YCAPLTSFDWNELEPRRIGTSSIDTTCTIWDIEKGAVETQLIAHDKEVYDIAWGEAGVFA
SVSADGSVRIFDLRDKEHSTIIYESPTPDTPLLRLAWNKQDLRYMATILMDSSKIVILDI
RSPAMPAAELQRHDASVNAIAWAPQSCRHICSAGDDGRALLWELPTVAGPNGIDPMLMYC
SDAEINQLQWSGALSDWIAVALGNKMQMLKV
NT seq 996 nt   +upstreamnt  +downstreamnt
atggataaatcaagtagtcagctcaactccgaaaatgtggtgacttttgattcacccaac
cccatctatgccatggccatctccgccgcgaaccccaccaccatcgccatcggaagctac
ctggaagaactcaacaaccgtgtcgaattactctccttctctctcgattcacactccctt
caacttctccccggcctctcattcgatcacccttacccccctaccaagctgcttttccac
ccttcctccgctcctcctacaaatctcctcgcttcttcaggggactatctccgcctttgg
gaggtcaaagatgcttccattgaccctgtcaatgtctttaacaacagtaaaagcagcgaa
tactgtgctcccttgacatcatttgattggaatgagcttgagccgcggagaattgggact
tccagcatcgacaccacgtgtaccatatgggatatcgaaaagggcgctgtggagacacag
ttgatagcccatgataaggaggtgtatgatatagcttggggggaagctggggtttttgct
tctgtttctgcagatggctccgtcaggattttcgatttgagggataaagagcattccacc
atcatttatgaaagtcccacccctgatacacctttgttgaggttggcttggaataaacaa
gatttgagatacatggcaactattttaatggacagtagtaaaattgtcattttagatatt
agatcacctgcaatgcctgcggcagaattgcagaggcatgacgcgagtgttaatgctatt
gcttgggctcctcaaagttgtaggcacatttgctctgctggggatgatgggcgggcattg
ctttgggaattgcccacggttgcggggccaaatggaattgatcccatgttgatgtactgt
tctgatgctgagatcaatcagctgcagtggtccggggcgttatcagattggatagctgtt
gcgctcgggaacaagatgcagatgttgaaagtgtga

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