Primulina huaijiensis: 140969454
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Entry
140969454 CDS
T11038
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
phua Primulina huaijiensis
Pathway
phua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140969454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140969454
03036 Chromosome and associated proteins [BR:
phua03036
]
140969454
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140969454
Coactivators
SAGA/TFTC/STAGA complex
140969454
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140969454
STAGA complex
140969454
TFTC complex
140969454
SAGA complex
140969454
SLIK complex
140969454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_SPT8
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Nbas_N
Beta-prop_HPS5
Beta-prop_Nup120_160
Cytochrom_D1
WD40_like
Beta-prop_DCAF12
Beta-prop_VPS8
PROPPIN
PALB2_WD40
LisH
Motif
Other DBs
NCBI-GeneID:
140969454
NCBI-ProteinID:
XP_073286914
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MDEEEIDKVVLAYLDKRGFKQAGLAFQQERHQNCKGSDTSSTAQIDPEIAKQILAFSEVD
GPAQYQEGYNKLRSWAYSSLDQYQHELVRVLYPVFIHGFMDLVAKGHISEARVFFNSFRG
DHEMIHARDLQKLEVVLSPSHLEEMEFARSLRQSKVSLKICQYSYNLLLQYLHKSQSIIM
LGIINEHINFQVSPGQPSSIADDAEFVALYGSGQDAADLINQKEIHWGLLEDSLEEKLEK
NGVSNADSEKADGELREGELEESKKKSVDGGKQATTLKKLKKDKIGSATTKASRSESTAV
SGAPHAKPELALPVISPEVEHSILDDLRNRVQLSGGALPSISFYTFINTHDGLNCASISN
DGSLVAGGFSDSSLKVWDIAKLGQPNEYSSLQGENELAPNGQRGSVSTGERPYTLFRGHC
RPVHSATFSPFGDYLLSSSSDSTIRLWSMDCNANLVCYKGHNYPVWDVQFSPLGHYFASA
SHDRTARIWSVDRIQPLRIMAGHLSDVDCVRWHANCNYVATGSSDKTVRLWDVQSGECVR
VFVGHRSMILSLAMSSDGRYMASGDEDGTIMMWDLASGRCISPLVGHNSCIWSLSFSCDG
SLLASGSADCTVKIWDVAASSKVTKNDENKSGSTNRLRSLKTLPTKSTPVYALQFSRRNL
LFAAGALSKQP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagaaattgataaagtggttctggcttatttagacaagaggggatttaag
caagcaggcctcgcttttcaacaagagaggcaccaaaactgcaaaggcagcgacacctcc
tcaactgcacaaatcgatcccgagattgccaaacaaatccttgcattctctgaagtggat
ggtcctgctcagtaccaagaagggtacaacaaacttcggtcgtgggcttatagttcattg
gatcaataccagcacgagttggttcgagtattgtatccagtatttattcatggatttatg
gatcttgtggctaaaggtcacatttcagaagccagagttttttttaatagctttcgagga
gaccatgagatgatccatgcacgtgacctccaaaaattagaggttgttctttctccgtcg
catctggaggaaatggaatttgcacgctccttaagacagagcaaagtgagcttgaagata
tgtcaatactcatacaacctacttctgcaatatttacacaagtctcaatcaattatcatg
cttggaatcatcaatgagcacatcaactttcaagtttctcctgggcaaccaagctcgatc
gctgatgatgctgaatttgttgcactttatggaagtggccaggatgcagctgatttgata
aatcagaaagaaatccattgggggttgcttgaagattctttagaagaaaagttggagaag
aatggtgtttccaatgcggattcggaaaaggcagatggagaactgagagaaggggaactg
gaagagagtaagaaaaaatctgttgatgggggaaaacaagccactacacttaaaaagctg
aaaaaggacaagattggcagtgcaacaacaaaggcttctcgttcagagagtactgcagta
tctggagctccacatgccaaaccagagctagccttgccagtaatatcaccagaggtggaa
cattctattcttgatgacttaaggaaccgtgtgcagttgagtggcggggcattgccttcc
atcagcttttatacctttatcaacacacatgatgggttgaattgtgcttcgatatctaat
gatgggtcattggtagctggtggattctcagactcgtcgttaaaggtatgggacattgca
aagcttgggcaaccaaatgagtattcttctttgcagggtgaaaatgagttggctcccaat
gggcagagaggtagcgttagcactggggaaagaccatataccttatttcggggacattgt
agacccgttcattcggccacgtttagtccatttggagattatcttctatcttcgtcgtca
gattcgacaattcgattgtggagcatggattgtaatgcaaatcttgtttgctacaaaggt
cataattatcctgtgtgggatgttcagtttagtccattaggacactattttgccagtgct
tcacatgatcggacggcaaggatctggtctgtggacagaatacaacctttacgaataatg
gcaggtcatttatctgatgtggattgtgtgcgatggcatgcaaattgcaactatgtagca
accggatctagtgacaaaacagtgcgattgtgggacgttcagagtggagaatgtgttaga
gtttttgttggtcacaggagtatgattttatctttagcaatgtcatctgacggccgttac
atggcatctggtgatgaagatggcacaataatgatgtgggatcttgctagtggtcgctgc
atttcccctttggttggtcacaactcttgcatatggtcgctttctttcagctgcgatggt
tcacttctggcatctggttctgccgattgcacagtgaaaatatgggatgtagctgccagc
tctaaagtgacaaaaaatgatgaaaacaaaagtggaagcaccaacagactaagatcactg
aagaccttgcctaccaaatctactcctgtctatgctttgcagttctctcggaggaatctt
ttatttgctgccggagctctgtcaaagcaaccatga
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