Primulina huaijiensis: 140970626
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Entry
140970626 CDS
T11038
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
phua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140970626
09123 Folding, sorting and degradation
03018 RNA degradation
140970626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140970626
03041 Spliceosome [BR:
phua03041
]
140970626
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140970626
mRNA degradation factors
5'-3' decay
Lsm complex
140970626
Spliceosome [BR:
phua03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
140970626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
140970626
NCBI-ProteinID:
XP_073288543
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Position
2:complement(22911531..22914129)
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AA seq
99 aa
AA seq
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MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGT
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagaaacagttttggatttagccaaatttgtggacaaaggtgttcaa
gtcaagctcactggtggaagacaagtaacgggaactctcaaagggtatgaccaattgctg
aatcttgtcctggacgaagcagtagaatttctgagagatcctgatgatccattgaagacc
actgatcaaaccaggcgccttggtttgatagtgtgtcgaggtactgctgtgatgcttgtt
tcacccacagatggaacagatgaaatcgccaatccatttgttcagccagacggcacatag
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