Primulina huaijiensis: 140971635
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Entry
140971635 CDS
T11038
Name
(RefSeq) protein PIR isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140971635
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140971635
Factors involved in mRNA localization
Other mRNA localization factors
140971635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
140971635
NCBI-ProteinID:
XP_073290090
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All DBs
Position
2:31201058..31218948
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AA seq
1193 aa
AA seq
DB search
MKQNQADLYLETYQVLDLEMSRLREIQRWQASAASKLAADMQRFSRPERRINGPTITHLW
SMLKLLDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSVQWQDTDSVREELDDLQIFLSTR
WAILLNLHVEMFRVNNVDDILQVLIVFAVESLELNFALLFPERHILLRVLPVLVVLASSS
EKDSESLYKRVKVNRLINIFKNDPVIPAFPDLHLSPTSILKELSTYFPKFSSQTRLLTLH
SPHELPPREAQDYQRHYLIINHIGAIRAEHDDFSVRFAASLNQLVLLRSMDGADLEWAKE
VKGNVYDMVVEGFQLLSRWTGRVWEQCAWKFSRPSKDPISSDSHEIASSYSDYEKVVRYN
YSAEERKAMVELVSYIKGIGLLLQKADTLVADALWETIHAEVQDFVQNTLAMMLRTTFRK
KKDLSRILSDMRTLSADWMANTSRPEPDMQTFQHGGEESRVSFFYPRPVAPTSAQIHCLQ
FLIYEVVSGGNMRKPGGLFGNTGSEIPVNDLKQLETFFYKLGFFLHVLDYTASVSDLIDV
GFLWFREFYLESSRVIQFPIECSLPWMLVDHVIESQDAGLLESVLIPFDIYNDAAQHALV
VLKQRFLYDEIEAEVDNCFDIFIAKLCDSVFTYYKSWAASELLDPSFLFAIDVGEKFSIH
PMRFTAILKMTRVKLLGRTINLRSLISERMNKICRDNIEFLFDRFESQDLCAIVELEKLI
CILRLAHELLSKDLTLDSFGLMLNEMQENLSLVSYSSRLASQIWLEMQNDFLPNFILCNT
TQRFVRSSRMPSVPAQKPSVPYAKPIFYCGNQDLNSAYQSFARLHSAFFGMPHMYSIVRL
LGSRSLPWLIRALLDHVSNKITTLEPLITGLQEALPKSIGLLPFDGGVAGCMRNVHEHLN
CWQSKPELKIETIRGIKEIGSVLYWISLLDIVLREVDTSQFMLTAPWLGLIPGPDGQIVQ
SHDGEDSPIISLFKSVAAASVSNPSFSNPSSFRLLARQAEAADLLYKSNNNAGSVLEYAL
AFTSAALDKYCSKWSIVPRTGFVDITTSKDFYRIYSGLQIEYLEEAVQAQTSNHGMLGDS
VAWGGCTIIYLLGQQLHFELFDFSHQVLNIAEVEAGSSTLAQKSPQFVQGLEMLIEDMKR
ARRLNNHVFSMLKARCPLEDKQACAIKQSGAILHRIKFENTVSAFETLPQKGA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatcaggctgacttgtatctagaaacttaccaagttttagacctggagatg
agccggctacgtgaaattcagcgttggcaagcatcagctgcgtcaaaactagcagctgac
atgcaacgtttttcaaggcctgagcgacgcatcaatggtcctaccataactcatctttgg
tctatgcttaagttgcttgatgttttggttcaacttgatcatttaaagaatgcgaaggct
agcatacccaatgacttctcttggtacaaaaggacatttactcaagtaagtgtgcagtgg
caagataccgattcagtgagggaagaactagatgatttacagatctttttgagcactagg
tgggcaattctgttgaatttgcatgttgagatgttccgggtcaacaatgttgatgatatc
ctccaagttctcatagtgtttgctgttgagtctctagaattaaattttgcgcttctcttt
cccgagcgccacattctacttcgtgttttgcctgttcttgttgtcttggcatcgtcatca
gagaaagatagtgagtccctgtacaaaagagtgaaagtcaacagactgatcaatatattt
aagaacgatccagtcatccctgcatttccagatcttcatctttctcctacatcgatacta
aaggaattgtccacatactttccaaagttttcttcccaaacccgtctgcttactcttcat
tcgccccatgagctgccacctcgggaggcacaagattatcagcgccattatttgatcatc
aaccatattggggctatacgtgctgaacatgatgatttctctgtacgctttgctgcttct
ttgaatcagcttgtgttattgaggtcaatggatggtgccgacttggagtgggcaaaggaa
gtcaaaggtaatgtctatgatatggttgttgaaggttttcagctcttaagtagatggact
gggcgtgtatgggagcagtgtgcatggaaattttcacgccctagcaaagatcccatttct
tcagattcacatgagatagcatcatcttattcagactatgagaaggtggtacgatataat
tatagtgctgaggaaagaaaagctatggttgaactcgtgagctacatcaagggaataggg
ttattgttgcagaaggcagatacattggttgccgatgccctgtgggaaactatccatgca
gaggtccaagattttgtgcaaaatacattggccatgatgctgcggactacttttcgtaag
aagaaagacctttccaggattctttctgatatgcgcacactttctgccgattggatggca
aatacaagcagacctgagcctgatatgcaaacattccagcacggaggagaagaaagtaga
gtgagcttcttttatccaagaccagtggcacccacttctgcacagatccattgcttgcag
ttcttgatatacgaggtagtatcaggaggcaacatgaggaaacctggtggcctttttggt
aatactggttctgagattccggtcaatgatttaaaacagctggagaccttcttctacaag
cttgggtttttcttgcacgtattagactacacagcttcggtttcagatctgatagatgtt
ggtttcctatggttcagggaattttatttggaatcttctcgagttatccagtttcccatt
gaatgttcccttccttggatgctggtggatcatgtaattgagtctcaagatgctggtctg
ctagagagtgtgttgataccctttgacatctataatgatgctgctcaacatgcactggtg
gtactcaagcaaagattcctttatgatgaaattgaagctgaggtggataattgctttgac
atatttatagcaaaattatgtgactctgtgttcacatactacaagagttgggcagctagt
gaactgcttgatccatcattcctatttgcaatagatgttggtgagaagttttcgatccat
ccaatgagattcactgcaatattaaagatgacaagagtgaagttgctgggacggactatt
aacttgagaagtttgatctctgagaggatgaacaaaatatgccgggataacattgaattt
ttgttcgatcgatttgagtctcaggatctatgtgcaattgtggaactggaaaagctcatt
tgcatcttgagactagctcatgaattactatcaaaagatcttactcttgattcatttggt
ctcatgttgaacgagatgcaagaaaatttatcccttgtttcatattctagcagacttgct
tctcagatttggttggagatgcaaaatgactttttaccgaacttcatattatgtaatact
actcagcgctttgtccgatcatcgagaatgccatcagttcctgctcagaagccatcagta
ccctatgcaaagccaattttttactgtggtaatcaagatctgaattctgcatatcaaagc
tttgccagattacatagtgccttttttggaatgcctcatatgtattctatagtgagactt
ctgggatcaagatcattaccatggctcatccgtgcattgttagaccatgtgtcaaataag
ataacgacccttgaaccattgatcactggattgcaagaggctttgcctaaatcaattgga
ttacttccttttgatggcggtgtagcaggttgcatgaggaacgttcatgagcatcttaat
tgctggcagtcgaaaccagaactcaagattgagactattcgcgggataaaggaaattgga
agtgtcttgtactggataagtctgcttgatattgttttgagagaagtggacactagccaa
ttcatgctaaccgctccttggctgggtcttattcctggtccagatggacaaattgtgcaa
tcccatgatggtgaagatagtcccattataagtctcttcaaatctgtagcggcagcaagt
gtttctaaccctagcttctcaaatccatcttcattccgactcctggctagacaggcggaa
gctgctgatctgctgtacaagtccaacaataatgccggaagtgtgctggaatatgcactt
gcttttactagtgcagctttagataaatactgtagtaaatggagcatagttcctaggact
gggtttgtcgacattacgacttcaaaggacttttatcgcatatacagtggactccaaatt
gagtacctggaggaagccgttcaagcacaaacaagcaatcatggaatgttgggtgattca
gttgcctggggtggctgcactatcatatacttgcttgggcaacagttgcatttcgaactg
ttcgacttttcgcatcaagtcctcaacattgccgaggttgaggctggatcaagcacattg
gcgcagaagagtcctcaatttgtccagggtttggagatgttgattgaagacatgaagaga
gccaggaggttgaataaccacgtattttcgatgttgaaagcgcgatgcccgttagaggac
aagcaggcttgtgcaatcaaacagagtggtgccattctgcacagaatcaagtttgagaac
acagtttctgcattcgaaacactgccacagaagggtgcctga
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