Primulina huaijiensis: 140973250
Help
Entry
140973250 CDS
T11038
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140973250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140973250
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140973250
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140973250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
140973250
NCBI-ProteinID:
XP_073292013
LinkDB
All DBs
Position
3:4746481..4747939
Genome browser
AA seq
270 aa
AA seq
DB search
MSLLPKSDSIQIRDVWADNLDEELALIRDIVDDYPYIAMDTEFPGIVLRPVGNFKNSGDY
HYQTLKDNVDLLKLIQLGLTFSDENGNLPTCGSDKYCIWQFNFREFNPNEDVFANDSIEL
LRQSGIDFAKNNEKGIDAKLFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCQSLP
DTQSGFFTLINVYFPVLYDVKHLMKFCNSLHGGLNKLAELLEVDRVGVCHQAGSDSLLTC
CTFKKLKENFFIGSMEKYSGVLYGLGVENG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttttgcccaaaagcgattcgattcaaatcagggacgtttgggccgataatttg
gatgaagaattggcattgattcgtgatattgtcgatgattatccttatatcgccatggac
accgagttcccgggaattgttcttcgtcccgtgggaaacttcaagaactcgggtgactac
cactaccagacattgaaagacaatgttgacctgttgaagctaatccagctaggactaaca
ttttcggacgaaaacggaaatctgcccacttgtggtagtgacaagtattgcatttggcaa
ttcaatttccgcgaattcaatccaaatgaggatgtctttgcaaatgattcaatcgagctg
ttgcgacaaagtggtattgacttcgcaaagaataacgaaaagggcattgatgccaagctt
tttggggagcttttaatgtcatctggtatcgttttgaacgacaacgtgtactgggtgacg
tttcatagtgggtatgattttgggtacttgctcaagctcttgacatgtcagagcttgcct
gatacgcagtctggattctttaccttgatcaatgtgtactttccagtgctttacgatgtc
aaacatttgatgaaattttgtaacagtttgcacggtgggttgaataagttggcggagttg
ttggaagtggacagagttggggtctgtcatcaggcaggttctgatagcttgcttacttgt
tgtacattcaagaaattgaaagagaacttcttcatcggctcgatggagaagtattccggt
gtgttgtatggtttaggtgttgagaatggatag
DBGET
integrated database retrieval system
