Primulina huaijiensis: 140973351
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Entry
140973351 CDS
T11038
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
phua Primulina huaijiensis
Pathway
phua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
140973351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phua04121
]
140973351
Ubiquitin system [BR:
phua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140973351
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
Motif
Other DBs
NCBI-GeneID:
140973351
NCBI-ProteinID:
XP_073292174
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Position
3:complement(5863676..5867414)
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AA seq
581 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDKDRNAVSLVCKSWYEIERWCRRRIFVGNCYAVAPEIVIRR
FPEVRELEMKGKPHFADFNLVPEGWGAYLDPWISAMSVAYPFLEEIKLKRMVVTDDSLEL
ISKSFKNFKVLVLSSCEGFTTDGLASIAANCRNLRELDLRESEVFDLNGHWLSHFPDNYT
SLVSLNMSCLHSEVNLSTLERLVARSPNLKTLRLNRAVPLEKLPNLLRRAPQLVDLGTGV
YSAEIRSDTFSNLTEAFSTCKQLEGLSGLWDVVQAYLPALYSVCSGITSLNLSYATIQSS
DLVKLVGQCRNLQRLWVQDYIEDSGLEAVAESCKDLQELRVFPSDPFGEEPNVSLTERGL
VSVSEGCPKLQSVLYFCRQMSNTALIAIARNRPKMIRFRLCIIEPRARDYITLEPLDTGF
GAIVEKCKDLRRLSLSGLLTDRVFDYIGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPMLNVEVIDESGHP
DSRPDSWPVEKLYIYRTVAGRRLDMPDYIWKMDEDKELEYS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaggttctggaacatgttttctccttcctcagctccgac
aaggatcggaacgctgtttccttggtgtgcaagtcttggtacgagatagagcggtggtgc
cgccgccgtatcttcgtggggaactgctacgccgtcgcgccagagatcgtgatccggagg
tttcctgaggtgagggagttggagatgaaggggaagccgcatttcgccgacttcaacctg
gtgccggagggttggggagcgtatctggacccgtggatctcggcgatgtcagtggcgtac
ccttttctcgaggagatcaagctcaagcgcatggtggtgacggacgatagcttggagctg
atctcgaagtcgtttaagaatttcaaagtgttggtgctctcgtcttgcgagggttttaca
actgacggtctcgcgtcgattgctgctaattgcaggaatcttcgagaacttgacttgagg
gaaagtgaagtgtttgatttaaatgggcattggcttagtcattttcctgacaactatacc
tcactggtgtcgctgaacatgtcttgcttacactctgaggtgaatttgtccaccttggaa
cgactggttgctcgttctcctaatctgaagacacttcggctcaatcgtgctgttcctctt
gagaagctccctaatctacttcgccgtgcacctcagttggttgacttaggtacaggtgtc
tattccgctgaaatccgatctgacacattctctaacttgacagaagcattttccacttgt
aagcagcttgaaggcttgtcaggtctttgggatgtggttcaagcttatcttccagccttg
tattccgtctgctccggtatcacgtcactaaatttaagttatgcaaccattcaaagttcc
gatctagtcaaacttgtcggccagtgtcgaaatttacagcgtctatgggttcaggattac
atcgaagacagtggtcttgaagctgttgcagagtcttgcaaggatctgcaggaacttcgg
gtgtttccttcagatccttttggagaagaaccaaatgtatctctcactgaacgggggctt
gtttctgtctcagagggctgccccaaacttcaatctgttctttacttctgccgccagatg
tcaaatactgctttgattgctatagcaaggaatcggcccaagatgatccgcttccgactg
tgtatcatcgagcctcgggcccgtgattacataacccttgaaccacttgatactggtttt
ggagccatcgtggagaagtgcaaggatttacggcgcctttccttgtctggcctcctcact
gatcgagtattcgactatattgggacacatgctaagaaactggagatgctttccatagct
tttgcaggggatagtgacttgggcctgcatcatgtattgtccgggtgtgaaagtctccgg
aaactggagatcagagactgtccatttggggacaaggctcttttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgctcagttagttacggagcgtgtaag
ctgcttggtcaaaagatgcctatgctcaatgtcgaagttatcgatgaaagtgggcatccg
gattcgagacctgatagctggcctgttgagaaactctacatttaccggacagttgcagga
cggagactcgatatgcccgattacatctggaaaatggatgaagacaaggaactggaatat
tcttaa
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