Primulina huaijiensis: 140973475
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Entry
140973475 CDS
T11038
Name
(RefSeq) exosome complex component RRP45A-like isoform X1
KO
K03678
exosome complex component RRP45
Organism
phua Primulina huaijiensis
Pathway
phua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140973475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140973475
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140973475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
140973475
NCBI-ProteinID:
XP_073292400
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Position
3:complement(8336910..8344223)
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AA seq
442 aa
AA seq
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MTLNEKKFIETALLSDLRIDGRGPFDYRNVAIKFGREDGSSEVQLGQTHVMGFVTSQLVQ
PYRDRPNEGTLSIYTEFSPMADPSFEIGRPGVFAVELGRIVDRGLRESRAVDTESLCVVA
GKWVWSIRIDLHILDNGGNLVDAANIAALVALLTFRRPECTVGGDNDQEVIIHSPEVREP
LPLIVHHLPVAITFAFIGSESTVVIDPSNFEEAVMGGKLTATLNTNGDVCAIQKAGGDGV
IQSVIMQCLRIASVKAADITNKITKAVESYNTERALRKIKRHPDPVVDVSKGAGMGVRCL
SMEMEKTRLKIEDRKVNRSDDMEIETHSSKKTGSRLGDAKFKSFIGGPSSWDPYSKGING
DELKASLASRAAATSVEKMDVLPSVKTQFTMIDKTPTEMDSTPSLQQTIETGEQTTKVKT
LMDAVKPKHRRKKKTYPNHDLS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacacttaacgagaagaagtttatcgaaacagcgctgctttctgatcttagaattgat
gggcgtggaccatttgattaccggaatgtggcgatcaagtttggcagggaagatggttca
tcagaggtgcagttgggtcaaacacatgtgatggggtttgtgacctcccaacttgttcaa
ccttacagggaccgccctaatgaaggaactctttcaatatacacagagttctctccaatg
gcagatccttcatttgaaataggccgtcctggggtatttgcagtggagttaggtcgcata
gttgatcgtggattgagggaaagcagggctgtggatacagaatcactttgtgttgttgcc
ggaaaatgggtttggtctattcgtattgatctccacattctagacaatgggggaaatctt
gttgacgctgccaatattgctgctttagtggctcttttgacatttcgaaggccggagtgc
acagtgggaggagataacgatcaagaagttatcatacattctcctgaggtgagggaacca
cttccattaattgtgcaccacctccctgtagcaataacctttgcgtttatcggtagtgag
agtacagtggtaattgatccatcaaactttgaagaagctgttatgggaggaaaattgact
gctactcttaatacgaacggtgatgtgtgtgctattcaaaaagctggaggagatggagtc
atacaaagtgttattatgcaatgcttgcgcattgcatctgtaaaggccgctgatataact
aacaaaataacgaaagctgttgagtcgtataatacagaaagagcattgagaaaaatcaaa
cgacaccctgacccagttgtagatgttagcaaaggtgccggaatgggagttcgttgtttg
tcaatggaaatggaaaaaacaagattgaaaattgaggatagaaaggtcaatcgaagtgat
gacatggaaattgaaacccactcatcgaagaaaactggaagcaggttgggtgatgcgaaa
tttaaaagtttcattggtggtccatccagttgggatccgtattccaagggtataaatggt
gatgaactgaaagcatctctcgcatcacgagctgcagcaacctctgttgagaagatggat
gtgttaccatctgtgaagacacagttcactatgattgataaaacccctactgaaatggat
tccacaccatcattgcaacagactattgagacaggagaacagacaaccaaagtaaagact
ttgatggatgcagtcaagccgaagcacagacggaaaaagaaaacctatccaaaccatgat
ttaagttaa
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