KEGG   Primulina huaijiensis: 140973540
Entry
140973540         CDS       T11038                                 
Name
(RefSeq) histone-binding protein MSI1-like isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
phua  Primulina huaijiensis
Pathway
phua03082  ATP-dependent chromatin remodeling
phua03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    140973540
   03083 Polycomb repressive complex
    140973540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phua03036]
    140973540
Chromosome and associated proteins [BR:phua03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     140973540
  Histone modification proteins
   HAT complexes
    HATB complex
     140973540
   HDAC complexes
    Sin3A-HDAC complex
     140973540
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     140973540
    PRC2.2
     140973540
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     140973540
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    140973540
  Chromatin remodeling factors
   NuRD complex
    140973540
   NuRF complex
    140973540
   NuRF complex (fruit fly)
    140973540
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_RFWD3 EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_HPS5 eIF2A Beta-prop_WDR19_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 140973540
NCBI-ProteinID: XP_073292526
LinkDB
Position
3:complement(16281527..16284757)
AA seq 426 aa
MGKDEDEMRGEVEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARLYDDDRSEYGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGTCNPDLRLRGHNTE
GYGLSWSQFKQGHLLSGSDDAQICLWDINAAPKNKVLDALQIFKIHEGVVEDVAWHLRHE
YLFGSVGDDQYLHIWDLRTPSVSKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDMRKISTALHVFDCHNREEVFQVGWNPKNETILASCCLGRRLMIWDLSRIDEEQTPEDS
DDGPPELLFIHGGHTSKISDFSWNPCEDWVMASVAEDNILQIWQMAENIYHDEDDLPGDD
SANKGS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggggaaggacgaggatgagatgcggggagaagtggaggagcgtttgataaacgaggag
tacaagatttggaagaagaacactccatttttgtacgatttggtcatcacccatgcgctg
gaatggccgtcgctcaccgtcgaatggttacccgacagggaggagcccccgggcaaggat
tattccgtgcaaaaaatgattttgggaacccacacttccgaaaacgagccaaattatctg
atgcttgcgcaggttcagcttccgctcgaggatgcggagaatgatgccagactttacgac
gatgaccgctccgaatatggtggatttggatgcgctaacggaaaggtgcaaattattcag
caaataaatcatgatggggaggtcaatcgagctcgttatatgcctcagaactcatttatt
attgctactaagacagttagtgcagaagtatatgtttttgactacagcaaacatccatcc
aagcctcctttggatggtacatgcaaccctgatttgaggctgaggggccacaataccgaa
gggtatggtttatcatggagtcagttcaagcagggccatttattgagtggttctgatgat
gcgcaaatatgcttgtgggacataaatgcagctccaaaaaataaggttctcgatgcattg
caaatattcaagattcatgaaggtgttgtcgaagatgtagcatggcatctcaggcatgaa
tacttgtttggttcagtgggagatgatcaatatctgcatatatgggatctccgtacgcca
tcagtgagcaagcctatacaatctgttgttgctcatcaaagtgaggtcaactgtttagct
ttcaatccattcaatgaatgggttgttgcgacggggtctactgacaagactgttaaatta
ttcgatatgcgaaagatttcaacagccctccacgtatttgattgtcacaacagggaggaa
gttttccaagttggatggaatccaaagaatgagaccatcttagcttcctgttgtcttggc
aggagacttatgatctgggatcttagcaggatcgatgaagaacagactccagaggactct
gacgacggaccaccagagctgttattcatacacggtggccacacaagtaaaatttcggat
ttctcatggaacccgtgtgaagattgggtgatggcaagtgttgctgaagataacatacta
caaatctggcagatggcggagaacatttaccatgatgaagatgatttgcctggagatgat
tccgcaaacaaaggctcctag

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