Primulina huaijiensis: 140973660
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Entry
140973660 CDS
T11038
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
phua Primulina huaijiensis
Pathway
phua03015
mRNA surveillance pathway
phua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140973660
09123 Folding, sorting and degradation
03018 RNA degradation
140973660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phua03019
]
140973660
03041 Spliceosome [BR:
phua03041
]
140973660
Messenger RNA biogenesis [BR:
phua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140973660
mRNA cycle factors
Stress granule specific factors
140973660
Spliceosome [BR:
phua03041
]
Complex C
Other components
Complex C specific factors
140973660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_3
RRM_7
RRM_Nup35
RRM_occluded
RRM_MARF1
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
140973660
NCBI-ProteinID:
XP_073292736
LinkDB
All DBs
Position
3:complement(20874522..20879017)
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AA seq
644 aa
AA seq
DB search
MSAPVQMQTQLQVVNAVPSGGAPFVTSLYVGDLDANVTDSQLYDLFSQMGDVVSVRVCRD
LTSRRSLGYGYVNYGNPQDAERAMEELNFTPLNGKPVRVMYSHRDPSIRRSGAGNIFIKN
LDKDIDHKGLHDTFSAFGNILSCKVVTNSSGQSMGYGFVQYAGEESAQKAIEKLNGMLLN
GKQVYVGPFLRKQEREMSVDKTIFNNVFVKNLSESTTEEDLKKTFGEFGSISSAAVMRNE
DGTSRCFGFVNFDNAEDASRAVDSLNGLKFDSKEWYVGRAQKKSERETELKHRFEQTVKE
TVDKSQGLNLYIKNLDDSISDEKLKEMFSSFGSITSCKVMRDPKGISRGSGFVAFSSPDE
ASRALSEMNGKMIASKPLYVALAQRKEDRRARLQAQFAQMRPISVMPTATPRMPMYSPGG
PGLGQQIFYGQPPPAMLPPQPGFGYQQQLVPGMRPGGPLMPNMFVPMVQQGPQGPRPGGR
RANGVPMQQVPQPVPVMQQPMLPRGRGYRYPPVRSIPDVSLQGMAGSMIPVPYEMGGMPL
RESGVSQPIPIGALASALANASPIEQRTMLGENLYPLVEQLEPEMAAKVTGMLLEMDQTE
VLHLLESPEALKAKVAEAMDVLRNVSQQQAGNSADQLASLSLND
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgcctgttcagatgcagactcaattgcaggtagtgaatgcggttccctccggc
ggggcgccgttcgtgacgtcactttacgtcggtgatctcgacgcgaacgtgacggattcg
caattgtacgatttgttcagccagatgggagatgtggtttctgttagggtttgtagggat
ttgactagccgtcgttcacttggatatggctacgtcaactacggcaaccctcaagatgct
gagagagcaatggaggagctgaatttcactcctctcaatggaaagccggttagggtgatg
tattctcatcgcgaccctagtatacgtagaagtggtgcaggaaatatctttattaagaat
ttggacaaggacatcgatcataaaggtcttcatgatacattttctgcgtttgggaacatt
ctctcctgcaaagtggttacaaattcttctggtcagtcaatgggctatggctttgtgcaa
tatgctggtgaggaatctgcccagaaagctatcgagaagctcaatggcatgctattgaat
ggaaagcaagtctatgttgggccattcctgcgcaagcaagaaagagagatgtcagtagac
aaaacaatatttaacaatgtcttcgtaaagaatttatctgaatcaacaactgaagaagat
cttaagaagacatttggcgaatttggatcaatatctagtgcagcggtgatgagaaatgaa
gatggaacgtcaagatgctttggatttgtcaactttgacaatgcagaggatgcttctaga
gctgttgactctcttaatggcctgaagtttgatagtaaggaatggtatgttggaagagct
cagaagaaatctgagagggaaacagaattgaaacatcgttttgagcagactgtgaaggaa
acagtagacaaatctcaaggactaaacctgtatataaaaaatcttgatgatagcatcagt
gatgagaaactcaaggaaatgttctcttcatttggatcgataacatcatgcaaggtgatg
cgagatcccaaaggaataagcagaggatcaggatttgttgcattctcctcacctgacgag
gcctctagagctctttctgaaatgaatggcaagatgattgctagcaaacctctttatgtt
gcacttgctcaaaggaaggaggatagaagagcacggttgcaggctcaatttgctcaaatg
cgaccaatttctgtcatgcctactgccactcctcgcatgcctatgtactctcctggtggc
cctggcttagggcagcaaatattttacggacaacctccacctgccatgctcccaccccaa
cctggattcgggtatcagcagcagcttgttcctggtatgagacctggtgggcctctcatg
ccaaatatgtttgtgcctatggtccaacaagggcctcaaggtccacgtcctggtggtagg
cgtgccaacggtgttcctatgcaacaagtcccacagcctgttcctgtaatgcagcagccg
atgcttcctaggggacgcggctatcgctacccccccgtgcgtagcattcctgatgtctct
ttgcaagggatggctggaagcatgattcctgttccttatgagatgggtggcatgccgttg
cgagaatcaggagtgtctcagcccattccaattggcgcgttggcatctgcacttgcaaat
gcttcgcccatagaacagcggacgatgctgggtgaaaatttgtatccacttgtggaacaa
ttggagccagagatggcagccaaggtgacaggcatgctattggagatggatcagactgag
gttttgcacttgttggagtcaccagaggctcttaaggctaaggttgcggaggctatggac
gtcctgcggaacgtgtctcagcagcaggctggcaactctgccgaccaattggcttctctg
tctttgaatgattga
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integrated database retrieval system
