Primulina huaijiensis: 140973976
Help
Entry
140973976 CDS
T11038
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
phua Primulina huaijiensis
Pathway
phua00040
Pentose and glucuronate interconversions
phua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140973976
Enzymes [BR:
phua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140973976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140973976
NCBI-ProteinID:
XP_073293253
LinkDB
All DBs
Position
3:complement(24602758..24607915)
Genome browser
AA seq
487 aa
AA seq
DB search
MLFRNPIILFFLLAYICSSISAAGFLNLTVAHQHPNPDAVVQETQRKVNESISRRSILLS
TPIIHDQSQCLTGNPIDDCWKCDSNWSTNRQRLADCGIGFGQSAMGGKGGRFYVVTDSSD
HDTVNPTPGTLRHAVIQDEPLWIVFQSNMVIKLKHELMFNSYKTIDGRGANVQITGNGCI
TLQYVSNVIIHNVHVYNCMPSGNTNIRSSPTHIGWRGKSDGDGISIFGSRNIWIDHCALS
HCTDGLVDAIMGSTAITISNNYFSHHDEVMLLGHDDKFLPDSGMQVTIAFNHFGEGLVQR
MPRCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTDPSAKEVTKRVDTNEGD
WSDWNWRTDGDIMVNGAFFVPSGGGLSMQYAKASSVEPKSVSLIDRLTMNAGVLGGPRDN
AVSISYGGGATTGGGGTGGGDYFGMNFAGGSATTLTSPTGALFLSLQFILILYVTNTNYG
SLLSLLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctttttcgaaatcccattatcttgttttttctcttagcctacatttgttcctcaatt
tccgctgctggattcttgaatctgaccgtcgctcatcaacaccccaacccagatgctgtt
gttcaagagacgcagaggaaagtaaatgaatccatatcaagaaggagtatactgctttca
acaccaataatccatgatcagtctcaatgtctgacagggaaccccatcgatgactgctgg
aagtgcgactcaaactggtcaaccaatcgccagcgactagccgactgtggtataggattt
ggacagtcggcaatgggtggcaaaggcggccgcttttatgttgttaccgattcctcagat
cacgacacagtgaaccctacccctggcacattacgtcacgctgtaatccaagatgaaccc
ttgtggatagtcttccaatcaaacatggttatcaagcttaaacacgagttgatgttcaat
agctataaaacgatagatgggcgtggtgccaatgtgcaaatcacgggcaatggatgtatt
acattgcagtatgttagtaatgtgatcatccacaatgtgcatgtttacaattgcatgcca
tcagggaatactaatattcggtcgagtcctactcacattgggtggaggggaaaatctgat
ggcgatgggatctcgatctttgggtccagaaatatctggattgatcactgtgctttgtca
cattgtacagatgggttggtggatgccattatggggtcaactgctattaccatttctaat
aactatttttctcaccatgatgaggttatgttgttaggacacgacgataagttcttgcca
gactccgggatgcaggtgacaatagcttttaatcactttggagaggggcttgtgcagagg
atgcccaggtgtaggagaggctacatacatgtggtgaacaacgattttacgcaatgggaa
atgtatgcaataggtggaagtggtaatcccactattaatagtcagggcaatcgttatact
gcaccgacagatcctagtgctaaagaggttacaaaacgcgtggacacgaacgagggagac
tggtccgactggaactggaggacagacggggacataatggtaaatggtgcattctttgtg
ccatcgggcggagggctgagtatgcaatatgccaaggcctctagtgttgagcccaaatct
gtgtccctcatcgatagactcaccatgaatgctggtgttcttggtggccccagggacaat
gctgtgagcatatcatacggcggaggggccaccaccggaggaggcggcacgggtggtggt
gattacttcggaatgaattttgcgggcggttccgccacaacactaacatctccgaccggt
gcattgtttctgtctcttcaatttattctgattttgtatgtaaccaacaccaactatggt
agcctactgtctttacttctatag
DBGET
integrated database retrieval system
