Primulina huaijiensis: 140975700
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Entry
140975700 CDS
T11038
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
phua Primulina huaijiensis
Pathway
phua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140975700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140975700
03036 Chromosome and associated proteins [BR:
phua03036
]
140975700
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140975700
Coactivators
SAGA/TFTC/STAGA complex
140975700
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140975700
STAGA complex
140975700
TFTC complex
140975700
SAGA complex
140975700
SLIK complex
140975700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_VPS8
ASA1
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_EIPR1
PAC11
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Nbas_N
Beta-prop_HPS5
Beta-prop_DCAF12
Tricorn_2nd
Cytochrom_D1
Beta-prop_ACSF4
PALB2_WD40
PROPPIN
Motif
Other DBs
NCBI-GeneID:
140975700
NCBI-ProteinID:
XP_073295659
LinkDB
All DBs
Position
4:24909769..24916860
Genome browser
AA seq
671 aa
AA seq
DB search
MDQEEIDKVVLAYLDRRGFKQAGLAFQQEKQQNTKGGENSSNAQIDPEIAKQILAFSEVD
GPAQYQEGYNKLRSWAYSSLDQYQHELVRVLYPVFIHGFMDLVAKGHISEARVFFNSFRG
DHEMIHARDLQKLEGVLSPSHLEEMEFARSLRQSKVSMKICQYSYNLLLQYLHKSQSITM
LGIINEHINFQVSPGQPSSIADDTEFVALYGSGQDAADLTNQKEIHWGLLEDSLEEKLEK
NGVSNADSEKADGELREGELEENKKKSVDGGKQATTLKKLKKDKAGSATTKASRSESTAV
SGAPHVKPELALPVIPPEVEHSILDDLRNRVQLSGGALPSISFYTFINTHDGLNCASISN
DGSLVAGGFSDSSLKVWDMAKLGQQNEYSSLQGENELAPNGQIRSNNTGERPYTLFRGHC
GPVHSATFSPFGDFLLSSSSDSTIRLWSMNFNANLVCYKGHNYPVWDVQFSPVGHYFASA
SHDRTARIWSVDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVR
VFIGHRSMILSLAMSSDGRYMASGDEDGTIMMWDLASGRCISPLVGHNSCIWSLSFSCEG
SLLASGSADCTVKIWDVAASSKVTKNEENKSGSTNRLRSLKTLPTKSTPVYALQFSRRNL
LFAAGALSKQS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaagaaatagataaagtggttctggcttatttagacagaaggggctttaag
caagcaggcctcgcttttcaacaagagaagcagcaaaacactaaaggcggcgaaaactcc
tcaaatgcacaaatcgatcccgagattgccaagcaaatcctcgcattctctgaagtggat
ggtcctgcacagtaccaagaagggtacaacaaacttcggtcttgggcttatagttcgttg
gatcaatatcagcatgagttggtccgcgttttgtatccagtatttattcatgggtttatg
gatcttgtggctaaaggtcacatttcagaagccagagttttttttaatagctttcgagga
gaccatgagatgatccatgcgcgtgacctccaaaaattagagggtgttctttctccttca
catctagaggaaatggaatttgctcgttccctaagacaaagcaaagtgagcatgaagata
tgtcaatactcatacaacctacttctgcaatatttgcataagtctcaatcaattactatg
cttggaatcatcaacgagcacatcaactttcaagtttctcctgggcaaccaagctctatt
gctgatgatactgaatttgttgcactttatggaagtggccaggatgcagctgatttgaca
aatcagaaagaaatccattgggggttgcttgaagattctttggaagaaaagttggagaag
aatggtgtttccaatgcagattcggaaaaggcagatggagaactgagggagggggaactg
gaggagaataagaaaaaatctgttgatgggggaaaacaagccactacacttaaaaagctg
aaaaaagacaaggctggcagtgcaacaacgaaggcttctcgttcagagagtactgcagta
tctggagctccacacgtcaaaccagagctagccttgccagtaataccaccagaggtggaa
cattctattcttgatgacttaaggaaccgtgtgcagttgagtggcggggcattgccttcc
atcagcttttatacctttatcaacacacatgatgggttgaattgtgcttcgatatctaat
gatgggtcattggtagctggtggattctcagactcatcgttaaaggtttgggacatggca
aagcttgggcaacaaaatgagtattcttctttgcagggtgaaaatgagttggctcccaat
gggcagatacgtagcaataacactggggaaagaccatataccttatttcgaggacattgt
ggacctgttcattcagccacgtttagtccatttggagattttcttctatcgtcgtcatca
gattcaacaattcgattgtggagcatgaattttaatgcaaatcttgtttgctacaaaggt
cacaattatcctgtgtgggatgttcagtttagtccagtaggacactattttgctagtgct
tcacatgatcggacggcaaggatctggtctgtggacagaatacagcctttacgaataatg
gcaggtcatttatctgatgtagattgtgtgcgatggcatgcaaattgcaactatatagca
actggatctagcgacaaaacagtgcgattgtgggacgttcagagtggagaatgtgttaga
gtttttattggtcacaggagtatgattttatctttagcaatgtcatctgacggtcgttac
atggcatctggtgatgaagatggtacaataatgatgtgggatcttgccagtggccgctgc
atttcccctttggttggtcacaactcttgcatatggtcactttctttcagctgcgaaggt
tcacttttagcatctggttctgccgattgcacagtgaaaatatgggacgtagccgccagt
tctaaagtgaccaaaaatgaagaaaacaaaagtggaagcaccaacaggctaagatcactg
aagaccttgcctaccaaatctactcctgtctatgctttgcagttctctcgaaggaatctt
ttatttgctgccggggctctctcaaaacaatcatga
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