Primulina huaijiensis: 140975700
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Entry
140975700 CDS
T11038
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
phua Primulina huaijiensis
Pathway
phua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140975700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140975700
03036 Chromosome and associated proteins [BR:
phua03036
]
140975700
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140975700
Coactivators
SAGA/TFTC/STAGA complex
140975700
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140975700
STAGA complex
140975700
TFTC complex
140975700
SAGA complex
140975700
SLIK complex
140975700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Nbas_N
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD40_like
Cytochrom_D1
PALB2_WD40
Beta-prop_VPS8
PROPPIN
Motif
Other DBs
NCBI-GeneID:
140975700
NCBI-ProteinID:
XP_073295659
LinkDB
All DBs
Position
4:24909769..24916860
Genome browser
AA seq
671 aa
AA seq
DB search
MDQEEIDKVVLAYLDRRGFKQAGLAFQQEKQQNTKGGENSSNAQIDPEIAKQILAFSEVD
GPAQYQEGYNKLRSWAYSSLDQYQHELVRVLYPVFIHGFMDLVAKGHISEARVFFNSFRG
DHEMIHARDLQKLEGVLSPSHLEEMEFARSLRQSKVSMKICQYSYNLLLQYLHKSQSITM
LGIINEHINFQVSPGQPSSIADDTEFVALYGSGQDAADLTNQKEIHWGLLEDSLEEKLEK
NGVSNADSEKADGELREGELEENKKKSVDGGKQATTLKKLKKDKAGSATTKASRSESTAV
SGAPHVKPELALPVIPPEVEHSILDDLRNRVQLSGGALPSISFYTFINTHDGLNCASISN
DGSLVAGGFSDSSLKVWDMAKLGQQNEYSSLQGENELAPNGQIRSNNTGERPYTLFRGHC
GPVHSATFSPFGDFLLSSSSDSTIRLWSMNFNANLVCYKGHNYPVWDVQFSPVGHYFASA
SHDRTARIWSVDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQSGECVR
VFIGHRSMILSLAMSSDGRYMASGDEDGTIMMWDLASGRCISPLVGHNSCIWSLSFSCEG
SLLASGSADCTVKIWDVAASSKVTKNEENKSGSTNRLRSLKTLPTKSTPVYALQFSRRNL
LFAAGALSKQS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagaagaaatagataaagtggttctggcttatttagacagaaggggctttaag
caagcaggcctcgcttttcaacaagagaagcagcaaaacactaaaggcggcgaaaactcc
tcaaatgcacaaatcgatcccgagattgccaagcaaatcctcgcattctctgaagtggat
ggtcctgcacagtaccaagaagggtacaacaaacttcggtcttgggcttatagttcgttg
gatcaatatcagcatgagttggtccgcgttttgtatccagtatttattcatgggtttatg
gatcttgtggctaaaggtcacatttcagaagccagagttttttttaatagctttcgagga
gaccatgagatgatccatgcgcgtgacctccaaaaattagagggtgttctttctccttca
catctagaggaaatggaatttgctcgttccctaagacaaagcaaagtgagcatgaagata
tgtcaatactcatacaacctacttctgcaatatttgcataagtctcaatcaattactatg
cttggaatcatcaacgagcacatcaactttcaagtttctcctgggcaaccaagctctatt
gctgatgatactgaatttgttgcactttatggaagtggccaggatgcagctgatttgaca
aatcagaaagaaatccattgggggttgcttgaagattctttggaagaaaagttggagaag
aatggtgtttccaatgcagattcggaaaaggcagatggagaactgagggagggggaactg
gaggagaataagaaaaaatctgttgatgggggaaaacaagccactacacttaaaaagctg
aaaaaagacaaggctggcagtgcaacaacgaaggcttctcgttcagagagtactgcagta
tctggagctccacacgtcaaaccagagctagccttgccagtaataccaccagaggtggaa
cattctattcttgatgacttaaggaaccgtgtgcagttgagtggcggggcattgccttcc
atcagcttttatacctttatcaacacacatgatgggttgaattgtgcttcgatatctaat
gatgggtcattggtagctggtggattctcagactcatcgttaaaggtttgggacatggca
aagcttgggcaacaaaatgagtattcttctttgcagggtgaaaatgagttggctcccaat
gggcagatacgtagcaataacactggggaaagaccatataccttatttcgaggacattgt
ggacctgttcattcagccacgtttagtccatttggagattttcttctatcgtcgtcatca
gattcaacaattcgattgtggagcatgaattttaatgcaaatcttgtttgctacaaaggt
cacaattatcctgtgtgggatgttcagtttagtccagtaggacactattttgctagtgct
tcacatgatcggacggcaaggatctggtctgtggacagaatacagcctttacgaataatg
gcaggtcatttatctgatgtagattgtgtgcgatggcatgcaaattgcaactatatagca
actggatctagcgacaaaacagtgcgattgtgggacgttcagagtggagaatgtgttaga
gtttttattggtcacaggagtatgattttatctttagcaatgtcatctgacggtcgttac
atggcatctggtgatgaagatggtacaataatgatgtgggatcttgccagtggccgctgc
atttcccctttggttggtcacaactcttgcatatggtcactttctttcagctgcgaaggt
tcacttttagcatctggttctgccgattgcacagtgaaaatatgggacgtagccgccagt
tctaaagtgaccaaaaatgaagaaaacaaaagtggaagcaccaacaggctaagatcactg
aagaccttgcctaccaaatctactcctgtctatgctttgcagttctctcgaaggaatctt
ttatttgctgccggggctctctcaaaacaatcatga
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