Primulina huaijiensis: 140975823
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Entry
140975823 CDS
T11038
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
phua Primulina huaijiensis
Pathway
phua03082
ATP-dependent chromatin remodeling
phua03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140975823
03083 Polycomb repressive complex
140975823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phua03036
]
140975823
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140975823
Histone modification proteins
HAT complexes
HATB complex
140975823
HDAC complexes
Sin3A-HDAC complex
140975823
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140975823
PRC2.2
140975823
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140975823
Heterochromatin formation proteins
Other heterochromatin formation proteins
140975823
Chromatin remodeling factors
NuRD complex
140975823
NuRF complex
140975823
NuRF complex (fruit fly)
140975823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
eIF2A
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
140975823
NCBI-ProteinID:
XP_073295856
LinkDB
All DBs
Position
4:25959108..25965143
Genome browser
AA seq
452 aa
AA seq
DB search
MKDRAAEHSVEERYSQWKSLVPVLYDWLANHNLVWPSLSCRWGPKVEQATYKNRQRLYLS
EQTDGTVPNTLVIANVEIVKTRVAAAEHIAQFNEESRSPFVKKSKTIIHPGEVNRIRELP
QNNKIVATHTDSPDVLIWDVERQPTRQPVLGATASRPDLILTGHRDNAEFALATCPMEPF
VLSGGKDKSVVLWSIHDHISSLAADQGAQKSPGSKGSAVNGKASDGSIVQPRGIFLGHED
TVEDVQFNPSSSQEFCSVGDDSCLILWDARSGSSPIAKVEKAHNADLHCVDWNPNDLNLI
LTGSADNTVRMYDRRSLTSGGVGSPIHIFEGHTAAVLCVQWSPDKASVFGSAAEDGMLNI
WDHGKVGNAGTEKSDYPPGLFFRHAGHRDKVVDFHWNAADPWTIVSVSEDGEKTGGGGTL
QIWRMIDLIYRPEEEVIAELDRFKSHLLSCSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatagagcagcggagcatagcgtggaggagcgctacagtcaatggaaatcccta
gtgcccgtcctctacgactggctagccaatcacaacctcgtttggccgtctctctcttgc
cgatggggaccgaaggtggaacaagcgacttacaagaaccgtcagcgattatatctttca
gaacagaccgatggcacagttccaaacacccttgtcatagctaacgttgaaatagtgaaa
actagagttgcagcagcagagcatattgcacagttcaacgaagaatcccgttcacctttt
gtaaaaaagagcaagaccatcatacatcctggagaggtgaatcgtatcagggaattgccg
cagaataacaagattgtggccactcacaccgacagtcctgatgttctcatttgggatgta
gaaaggcaacctactcgtcaacctgttttaggtgctacagcatctcgtccggatctgata
ctgactggtcatcgagataatgctgaatttgctctagccacatgtcctatggaacctttt
gtgctctctggaggcaaggacaagtctgtggttttgtggagtatccacgatcacatatca
tcattggcagcagatcagggagctcaaaaatcccctggatctaagggaagtgctgtcaat
ggtaaagcttctgatggctccattgttcaacctcggggtattttcctagggcacgaggat
accgtagaagatgtacagtttaacccatcaagctcgcaggagttctgcagcgttggtgat
gattcttgccttatactgtgggatgcgagaagtggttcttctcccattgcaaaggttgaa
aaggctcacaatgctgatcttcattgtgtcgattggaatcctaatgatttaaatctgatt
ttgactggttctgctgataatactgttcgaatgtatgatcgtcgaagtcttacctctgga
ggagttggatctcccattcacatatttgaaggtcatactgctgctgttctttgtgtccag
tggtctccagacaaggcatctgtctttggcagtgctgcagaagatggcatgttgaatatc
tgggatcatggaaaggtgggtaatgctggaacagaaaaatcagattatccccctggatta
ttctttcgacatgcggggcacagggataaggtggttgacttccattggaatgctgcagat
ccatggacaattgttagcgtgtctgaagatggagaaaagactggagggggaggtacattg
cagatatggcgaatgattgacctgatttatcgtccagaagaagaggtcattgcggagctg
gataggttcaaatctcatttgctgtcatgctcctcttga
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