Primulina huaijiensis: 140977369
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Entry
140977369 CDS
T11038
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
phua Primulina huaijiensis
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phua03021
]
140977369
03036 Chromosome and associated proteins [BR:
phua03036
]
140977369
Transcription machinery [BR:
phua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140977369
Chromosome and associated proteins [BR:
phua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
140977369
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
Tex_central_region
HHH_3
HHH_9
OB_PDCD11
S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
140977369
NCBI-ProteinID:
XP_073298207
LinkDB
All DBs
Position
5:complement(23462479..23471691)
Genome browser
AA seq
1536 aa
AA seq
DB search
MAGNTVISDDEDEIGVEEEEIDEETYGDRTHDGDGDEDDEDDEEGQDEYEKDGFIVDDVD
EEEGEEEENRADSDEERQKKKKRKKRDSERNYVLDEDDYELLQESNISVPRPKLESKKFK
RLKKARRDVEEGSSGFSDEEEFDGNGIGGRTAEEKLKRSLFGDDDGQPLEDIAEEDEQAE
EEEDVDIGEEDEMADFIVDEEEVDEHGAPVRRKKPKKSRQRPGVLSYALQEAHEIFGDVE
DLLRIRKLEVRDRYGETDKRSLEDQFDPSVLSEKYMTEKDDRIREIDIPERMQISEEGTG
QPAMDDLNIELEREWIFNQLVGGVVPPLMNKRGSAAEDLNEVKSHIARFLELMHVQKLDI
PFIAMYRKEEIFSLLQEPDEPEADIQNDPNWRPTLKWHKVLWTIHDLDKKWLLLQKRKSA
LQLYYNKRFEEESRRVYDETRLFLNQQLFESVSKSLKAADSERELDDVDSKFNLHFPPGE
VVLDEGQFKRPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLEKMRMDELEDAKETP
EEMASNFTCAMFETSQAVLKGARHMAAVEISCEPCVRRHVRSIFMENAVVSTSPTSDGNM
AIDSFHQFAGVKWLRDKPFTRFEDATWLLVQKAEEEKLLQVTIKLPEVVLDKLISDSNDY
YLSDGVSRSAQLWNEQRKLILHDAFYNFLLPSMEKEGRSLLTARAKTWLLWEFGKLLWDK
VSVAPFQRKENDVNTDEEAAPRVMACCWGPGKPATTFVMLDAAGEILDVLNAPSLSLNNQ
NANAQQRKRNDQQRVQKFMMDHQPHVVSLGAANLSCTRLKEDIYEIIFKMVEDNPRDVGH
NMDNLNIFYGDESLPRLYENSRVSVDQLPSQEGIIRRAVALGRYLQNPLAMVATLCGPGR
EILSWKLHPFENFLTPDEKYGMVEQVMVDVTNQVGLDVNLASSHEWLFAPLQFISGLGPR
KAASLQRSLVRAGAIFTRKDLLTHHGLGKKVFINAVGFLRVRRSGLTSSSTQFIDLLDDT
RIHPEFYGLAQELAKDIYREDVNDDGNDDDDDMLEMAIEHVREKPQLLRAVDVNEYADQK
NRLNRKETLNDIRLELIEGFQDRRRTYVEPSQDDEFYMISGETEETLSEGRIVQATVRRI
QPQRAICVLESGLTGMLSKEDIADDWRDINELSDKLHEGDIITCKIKSIQKNRYQVFLTC
RESEMRNNRFQSHRGMDPYYHEERSTSHTEQEKARKEKELAKKHFKPRMIVHPRFQNITA
DEAVEFLSNKDPGESVIRPNVRGPSHLTLTLKIYNGVYANKDIVEGGKEHKDITSLLRIG
KTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRRGTKYEVDELLRIEKSENPMRI
VYCFGISYEHPGTFILTYIRGSNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDP
LDSAPSIRSVAAMVPMRSPATGGSSGFGGGWGGSAQDDRWRGDQSMDRDRTSRTAGRGEY
RNGGGPEGHPSGASRSYGSRGRLRERGSYGGSRGDR
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaacacagtaatctccgacgatgaagatgagattggtgtcgaggaagaagaa
attgacgaagagacttacggagaccgaacccatgacggtgacggcgatgaggatgatgaa
gacgatgaagaagggcaggatgaatatgagaaagatggtttcatagtggatgatgttgat
gaagaagagggggaggaagaagaaaacagggctgatagtgatgaggagaggcaaaagaag
aagaaaaggaagaaaagggactctgagaggaattatgtgcttgatgaagatgattatgaa
cttcttcaggagagcaacatctccgttcctcgcccaaaacttgagagtaagaagttcaaa
cgattgaaaaaggcacggagagatgtggaagaaggctcgtctgggttttctgatgaagag
gaattcgatggaaatggaataggagggcgcacagctgaggagaagctcaaacgtagcttg
tttggtgatgatgatggacaaccccttgaggatattgccgaggaggacgaacaggcagaa
gaagaggaggatgtagacattggtgaagaagatgaaatggctgattttattgttgatgaa
gaagaagttgatgaacatggagctcctgtgaggaggaagaagcccaaaaagagtaggcaa
cgacctggagtattatcgtatgcactccaggaagcacatgaaatatttggagatgttgaa
gaccttttgaggatacgcaagttggaagtgagggacagatatggtgaaactgataaaaga
agccttgaagatcaattcgatcccagtgtactttctgagaagtatatgactgaaaaggat
gatcgaattagggaaatagacattcctgaaagaatgcagatatctgaagaaggtactggt
caacctgcaatggatgatctcaacattgagttggagagagagtggatattcaatcagctt
gtcggtggtgtagtgccacctttaatgaacaagagaggttctgcagctgaagatttaaat
gaagtcaagagccatattgcaagatttttggaattaatgcacgttcagaagttagatata
ccattcattgctatgtaccggaaagaggagattttcagcctattacaagaaccagatgag
cctgaagctgacattcaaaatgaccctaactggagaccaacactaaaatggcacaaggtg
ctttggacaatccatgacttggataagaagtggcttcttcttcagaaaagaaagagtgca
ctacagttatactacaacaagcggttcgaagaagagtcacgaagagtatacgatgagacg
cggctctttttaaaccaacaactctttgaatcagtttccaagtcactcaaagctgctgat
tcagaaagagagctggatgacgttgactcaaaatttaatttgcactttccccctggcgaa
gtcgtcctagatgaggggcagtttaaaagaccaaagaggaagtctcagtacagcatttgc
agtaaagctggcttatgggaggttgcaaacaagtttggttacagttctgagcagtttgga
ttgcagatttctctggagaaaatgagaatggatgaattggaagatgcaaaggaaacacct
gaagaaatggcctctaattttacgtgtgctatgtttgaaacgtctcaagctgttctcaaa
ggtgcaaggcacatggcagctgttgagattagctgtgaaccatgtgtccggaggcacgtc
cgtagcatctttatggaaaatgctgtagtgtcaaccagtcctacatctgatggtaacatg
gcaattgattcttttcaccaatttgctggagtcaagtggttacgagacaaaccatttact
agatttgaggatgcaacttggcttttagttcagaaagctgaagaggagaagctccttcaa
gtaaccatcaagctaccagaagtagttctcgataagctgataagcgattcaaacgattat
tatctgagtgatggagtgagcagatccgctcaattatggaatgaacagagaaaattgatt
cttcatgatgcgttctacaattttcttctaccttcaatggaaaaggaaggtagatctctt
ctgactgctagagcaaaaacctggttgctatgggaatttggaaagctgttgtgggacaaa
gtgtctgtggcaccatttcagcgaaaagaaaatgatgtcaatacggatgaagaagcagca
cccagggttatggcttgctgctggggccctggtaagccagctactacttttgtcatgctg
gatgcagctggagagattttagatgtgttgaatgctccatcactcagccttaacaatcag
aatgctaatgctcagcaacgtaagagaaatgatcagcagcgggtgcagaaatttatgatg
gaccaccaaccacatgtcgtctctcttggggcagctaatttgtcttgtactcggctgaag
gaagatatttacgagattatattcaaaatggtggaggataatccgagagatgttggtcac
aatatggataatttgaatattttctatggtgacgaatctcttccacgtctatatgaaaat
tctcgcgtatctgtggatcagcttccctcccaggaaggtattattagacgtgccgtggct
ctgggacgctatcttcagaatccattagccatggttgccacattatgtgggccaggtagg
gagatattatcttggaaactacatcctttcgagaattttctcactcctgatgagaagtat
gggatggttgaacaagttatggtggatgtaactaaccaagttggtcttgatgttaacttg
gcttccagtcacgaatggttgtttgctcctctgcagtttatttctgggcttggacccaga
aaagcagcttctctccaaaggtctttagtaagagctggagccattttcactaggaaagac
ctgttgacacatcatggtcttggtaaaaaggttttcattaatgcagttggattccttcga
gtccgtcgtagcggattgacgtccagtagtactcaatttattgatttgttagatgataca
agaattcatccagagttttacggccttgctcaagagctggccaaagatatttaccgggag
gatgtcaatgatgatggcaatgatgatgatgatgatatgctggaaatggccattgaacat
gtcagggaaaagcctcagttattgagggctgtcgatgttaatgaatatgccgatcagaaa
aatcgtttgaaccgaaaagaaaccctgaatgatataagattggagttaattgaaggattc
caagatcgtcgcagaacatatgtagaacctagtcaggatgatgaattttacatgatctca
ggagaaactgaagaaactttatcggaaggaagaattgtacaagcaacagtgcgaaggatt
caacctcaaagagctatttgtgtccttgaatctggattgactggcatgctcagcaaggaa
gatattgctgatgattggcgggatattaatgaattatctgataaacttcatgaaggtgat
attataacatgcaaaatcaaatcaattcaaaaaaatcgttatcaggtgttcttaacttgt
agagaaagtgaaatgaggaataaccgcttccagagccatcggggtatggatccttactat
catgaagaacgcagcacttcacacactgagcaagaaaaagctcgtaaagaaaaggagctt
gcaaagaaacattttaagccaaggatgattgtccaccctcgattccaaaatattacagct
gatgaagcagtagagtttctttcaaacaaggatcctggtgaaagcgtcatccgtccaaac
gttcgtggtccttcacatttgactttaacattgaaaatctataatggggtttatgcaaac
aaggacatagttgaaggtgggaaggaacataaggacatcacaagcttgcttcgaatagga
aaaacattgaaaattggagaggacacctttgaggatcttgatgaggtaatggatcgatat
gtggatccattggtagctcatttgaaggcaatgcttaattacagaaagtttaggaggggc
actaaatatgaagttgatgagctccttagaatcgagaaatctgagaatccaatgagaatc
gtctattgctttggcatatcctatgaacatcctggcacattcatcttaacttacatccga
ggttcaaatccacatcacgaatacataggtctctatccgaagggatttaaattccggaag
cgaatgtttgaggacatagaccgtcttgtggcatatttccagagacacattgatgatcct
cttgattctgcaccatcaattcgatctgttgccgctatggttccaatgagaagtcctgca
actggtggctcatctggttttggtggaggttggggtggttcagcacaggatgacaggtgg
agaggtgaccaatctatggaccgagataggacttctagaacagcagggagaggtgagtat
agaaatggtggtggcccggagggtcatcccagcggggcttctagatcatacggtagccgt
ggacgtttgcgtgagcgaggctcatatggtggtagtaggggagacaggtag
DBGET
integrated database retrieval system
