Primulina huaijiensis: 140977493
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Entry
140977493 CDS
T11038
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
phua Primulina huaijiensis
Pathway
phua03030
DNA replication
phua03420
Nucleotide excision repair
phua03430
Mismatch repair
phua03440
Homologous recombination
phua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140977493
03420 Nucleotide excision repair
140977493
03430 Mismatch repair
140977493
03440 Homologous recombination
140977493
03460 Fanconi anemia pathway
140977493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phua03000
]
140977493
03032 DNA replication proteins [BR:
phua03032
]
140977493
03400 DNA repair and recombination proteins [BR:
phua03400
]
140977493
Transcription factors [BR:
phua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140977493
DNA replication proteins [BR:
phua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
140977493
DNA repair and recombination proteins [BR:
phua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
140977493
MMR (mismatch excision repair)
140977493
DSBR (double strand breaks repair)
HR (homologous recombination)
140977493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
140977493
NCBI-ProteinID:
XP_073298331
LinkDB
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Position
5:complement(4719946..4723524)
Genome browser
AA seq
624 aa
AA seq
DB search
MAKTVSPDAISTILANPCPDSTSDLPEIIIQVVDLKPTGSKYMFMASDGKKKVRALLQST
LSSEVTSGNIQNLGLIRILDYTLNDIPTKNEKFLIVSKCESVCPALESEYKSEVKSEETE
MVLKPEQEIHVKNEVKSESTGIVLKPKQEIVAKSAHQIVQEQHGNMAPAARLSMTRRIHP
LVSLNPYQGNWTIKVRVTSKGNMRSYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKF
YDKFQMGKVYFISKGTLKVANKQFKTVPNDYEMTLNENSEVEEVFNEAAFIPETKFNFVP
IDELGPYVHGRELVDVIGVVQDVSPTMSIRRKSNNESVPKRDITIADETKKTVVVSLWND
LATNVGQELLDIADKSPIVAIKSLKVGDFQGVSLSTLSKSVLVVNPATPEAKKLRSWFES
EGRETPMASVGSGLSPSSKGGVRSMYSDRVSLAHITNNPLLGEDKPVFFCIKAYISSIKP
DQTMWYRACKTCNKKVTEAVGSGYWCEGCQKNEEECSLRYIMAVKVSDASGEAYLSVFND
QAEMLLGCSADELNALKSQDEGSSYQMKLKEVTWVPHLFRVSVTPHEYNNEKRQRITVKA
VAPIDYVAESNHLLEEISKMKVSK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacggtgagcccagatgcgatatctacgattcttgctaacccgtgtcctgat
tctacgtcagatttgccggaaattatcatacaagttgtcgatctgaagcctaccgggtcg
aaatacatgtttatggcgagtgatggtaagaagaaggtgagggcactgttgcagtcgact
ttatcatcggaagtaacctctgggaacattcagaatctgggtctcattcgcattcttgat
tacactctgaacgacatcccaacaaagaacgaaaagttcttgattgtatcaaaatgcgag
tctgtatgtccagcgcttgagtcagagtacaagtcagaagtgaaatctgaggaaactgag
atggtgttgaagcctgagcaggagattcatgtcaagaatgaagtaaagagtgagagtacc
ggcattgtgttgaagcctaagcaagaaattgtggctaaatcagctcatcaaatagttcaa
gaacaacatggaaatatggcacctgctgcacggttgtccatgactaggagaattcatccg
cttgtgtccttgaatccatatcagggtaattggaccataaaggtccgtgtcaccagcaaa
ggaaacatgcgttcttacaagaatgctagaggagaaggttgtgtgtttaatgtagagttg
acagatgaagatggaacacaaatacaagcaacgatgttcaacgaggcagcccggaagttc
tatgataagtttcagatggggaaggtctattttatatcgaagggcacattgaaagttgcc
aacaagcaattcaaaactgtaccaaatgattatgaaatgaccttgaatgaaaattctgaa
gtcgaggaagtcttcaatgaggcagcttttattcctgaaacaaaattcaattttgtcccc
attgatgaactaggcccatatgtccatggaagagaacttgtggatgtaattggtgttgtc
caagatgtatctcctacaatgagcattcggaggaaaagtaacaatgagtcggtgccaaag
cgtgatataacaattgctgatgagacgaaaaagaccgtagtggtgtctctttggaatgat
cttgccacaaatgttggacaggaactgctggatattgcagataaatctcctattgttgcg
ataaaatctctgaaagttggagatttccagggagtatcattgtcaacattgagcaaaagc
gttttagtagtcaatccagcaacaccggaagccaaaaagttgagatcttggtttgaatct
gaaggtagagaaacacctatggcctctgtaggttctggtttaagcccttcctcgaaaggt
ggagtgcgttctatgtactctgaccgggtctctttggctcatattactaataaccccttg
ttgggtgaggataagcccgtatttttctgcatcaaagcgtacataagctctatcaaaccc
gaccaaacaatgtggtatcgggcttgcaagacatgtaacaagaaagttaccgaagctgtt
ggttcgggctattggtgtgaaggatgccaaaaaaatgaagaagagtgcagtttaagatac
ataatggcagtaaaagtttccgatgcgagcggtgaagcctatctatctgtgttcaatgat
caagcagaaatgttacttggatgctcagcagatgagctaaatgcattgaaatctcaggat
gaaggcagttcttatcagatgaaactgaaagaagttacatgggttcctcaccttttccga
gttagtgttacaccacatgagtataacaacgagaagaggcagaggataactgttaaagct
gttgcgcctattgattacgtagctgaatccaatcatttgcttgaagaaatatcaaagatg
aaagtttctaaatag
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