KEGG   Primulina huaijiensis: 140978088
Entry
140978088         CDS       T11038                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
phua  Primulina huaijiensis
Pathway
phua03013  Nucleocytoplasmic transport
phua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:phua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    140978088
  09122 Translation
   03013 Nucleocytoplasmic transport
    140978088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phua03019]
    140978088
   03041 Spliceosome [BR:phua03041]
    140978088
Messenger RNA biogenesis [BR:phua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     140978088
Spliceosome [BR:phua03041]
 Complex C
  Other components
   EJC/TREX
    140978088
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    140978088
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd eIF2A NBCH_WD40 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_NUP159_NUP214 Beta-prop_IFT80_2nd DUF7099 Beta-prop_WDR41 WD_LRWD1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 140978088
NCBI-ProteinID: XP_073298967
LinkDB
Position
6:complement(20160469..20164612)
AA seq 313 aa
MEESLPFKNLHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWHIEPHGHSKAKDSE
LKGHADSVDQLCWDPKHADLIATASGDKTVRLWDARSAKCSQQVELSGENINITYKPDGT
HIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGDIFFLTTGNGTVEILAYPSL
KAVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDMKEMLCIHTFTKLEWPVRTLSF
NHTGEFIASASEDLFIDISNVETGRSIHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIFGFENA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggaatcactgcccttcaaaaacctccacagtagggagtaccaaggccacaagaag
aaggtgcattcggtggcgtggaattgcacgggcacgaaactagcttcaggctctgttgat
cagactgctcgaatatggcacattgaaccccacggtcatagcaaagctaaagatagcgag
ctaaaaggccacgcagatagtgtcgatcagttatgctgggatccaaaacatgctgatttg
attgcaactgcatcaggcgataagacagttcgcttgtgggatgctcgtagtgcaaaatgc
tcacagcaggtagagctcagcggggagaacataaatattacctataagcctgatggcact
catatagccgtcggtaacagggatgacgaattaactattttggatgttcgcaaattcaag
ccaatacataaacgcaagttcaattatgaggtgaatgagattgcatggaacatgacaggg
gacatattctttttaactactgggaatggtactgtagaaatacttgcatatccatccctg
aaggcagttgacacacttatggctcatactgctggttgctattgtattgcgattgaccca
ttgggaagatattttgctgttggaagcgctgactcattggtcagtctttgggatatgaaa
gaaatgctctgtatccacacattcactaaacttgaatggcctgtccggacattgagtttc
aaccacacgggagaatttattgcttctgcgagtgaggacttgtttatcgatatttccaat
gttgaaactggaagatccatccaccagattccatgccgggctgccatgaacagtgtggaa
tggaatcctaagtacaacttacttgcatatgctggagacgataaaaacaagtatcaggct
gatgaaggcgttttccggatatttggctttgagaatgcgtag

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